DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and LPAT4

DIOPT Version :10

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_565098.1 Gene:LPAT4 / 843840 AraportID:AT1G75020 Length:378 Species:Arabidopsis thaliana


Alignment Length:384 Identity:113/384 - (29%)
Similarity:178/384 - (46%) Gaps:64/384 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IKMGSLEK--LKQLRLIH-LCIALTFFTSGLCINFIQLLMHVFIKPIDKRLF-----RKLMYYAC 66
            :|..:|:.  |..||::. |.|.|.|.::.    |:.||....|..:..||.     ||::    
plant     7 LKSDNLKNRPLTPLRILRGLMILLVFLSTA----FMFLLYFAPIAALGLRLLSVQQSRKVV---- 63

  Fly    67 YSLYSQLIFVSDWYA----------GSKMTVYMDKEDFEKHAGKEHVLLIMNHKYEIDWLNGWMI 121
                 .||| ..|.|          |:.:....|....||     .||||.||:.|:||:..|.|
plant    64 -----SLIF-GLWLALWPYLFETVNGTTVVFSGDIIPVEK-----RVLLIANHRTEVDWMYLWNI 117

  Fly   122 CEKLGVLGNCKAYAKKAIRYVPIIGWGWWLAEFVFLNRNFDQDKTIITEQLKVVFSYPDPTWLLL 186
            ..:.|.||..|...|.::..:||.|||:.:.||:.:.|..:.|:.::.:.|.......:|.||.|
plant   118 ALRKGCLGYIKYVLKSSLMKLPIFGWGFHVLEFIPVERKREVDEPVLLQMLSSFKDPQEPLWLAL 182

  Fly   187 NAEGTRFTPAKHEASVKFAQERGMTVLKHHLIPRTKGFTASLAPIRGLCPVIYDINLAYRPTDKT 251
            ..|||.||..|.:.|.|||.|.|:..|.:.|:|:|:||...|..:......:||:.:||:|  :.
plant   183 FPEGTDFTEEKCKRSQKFAAEVGLPALSNVLLPKTRGFGVCLEVLHNSLDAVYDLTIAYKP--RC 245

  Fly   252 PATMLSLLHGKSVEPHLLMRRIPLEQVPEDEKEAAAWLQNLFVEKDKIIDSFLETGSFFKTSGIK 316
            |:.|.::......|.|:.:||:.|:::|.:|.|::|||.:.|..|||::..|...|.|       
plant   246 PSFMDNVFGTDPSEVHIHVRRVLLKEIPANEAESSAWLMDSFKLKDKLLSDFNAQGKF------- 303

  Fly   317 EVPAYVNKRRLCSLVNFVCWAVF----SLSCIFYYV---------ITSLLAANWTAFIT 362
                 .|:|....|....|.|.|    ||:.:|.|:         :.:.|:..:..|.|
plant   304 -----PNQRPEEELSVLKCIATFAGVISLTVVFIYLTLYSHSCFKVYACLSGTYLTFAT 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 108/369 (29%)
LPAT4NP_565098.1 PLN02510 7..378 CDD:178126 113/384 (29%)

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