DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and LPAT3

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_175537.1 Gene:LPAT3 / 841549 AraportID:AT1G51260 Length:376 Species:Arabidopsis thaliana


Alignment Length:375 Identity:120/375 - (32%)
Similarity:203/375 - (54%) Gaps:15/375 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LIHLCIALTFFTSGLCINFIQLLMHVFIKPIDKRLFRKLMYYACYSLYSQLIFVSDWYAGSKMTV 87
            |:.:.:.:.|..|||.:|.|||:..:.::|..:.|:|::.......|:.|||::.||:|..|:.:
plant     7 LVFIPVGVLFLISGLIVNIIQLVFFIIVRPFSRSLYRRINKNVAELLWLQLIWLFDWWACIKINL 71

  Fly    88 YMDKEDFEKHAGKEHVLLIMNHKYEIDWLNGWMICEKLGVLGNCKAYAKKAIRYVPIIGWGWWLA 152
            |:|.|..|. .||||.|::.||:.:||||.||::.:::|.||:..|..||..:|:|||||..|.:
plant    72 YVDAETLEL-IGKEHALVLSNHRSDIDWLIGWVMAQRVGCLGSSLAIMKKEAKYLPIIGWSMWFS 135

  Fly   153 EFVFLNRNFDQDKTIITEQLKVVFSYPDPTWLLLNAEGTRFTPAKHEASVKFAQERGMTVLKHHL 217
            :::||.|::.:|:..:....|.:..:|...||.|..||||||..|.||:.::|..|.:...::.|
plant   136 DYIFLERSWAKDENTLKAGFKRLEDFPMTFWLALFVEGTRFTQEKLEAAQEYASIRSLPSPRNVL 200

  Fly   218 IPRTKGFTASLAPIRGLCPVIYDINLAYRPTDKTPATMLSLLHGKSVEPHLLMRRIPLEQVPEDE 282
            |||||||.::::.||...|.|||..|.......|| |:|.:..|:|.|.:|.|||..:.::||.:
plant   201 IPRTKGFVSAVSEIRSFVPAIYDCTLTVHNNQPTP-TLLRMFSGQSSEINLQMRRHKMSELPETD 264

  Fly   283 KEAAAWLQNLFVEKDKIIDSFLETGSFFKTSGIKEVPAYVNKRRLCSLVNFVCWAVFSLSCIFYY 347
            ...|.|.|:||:.||..::.:. |...|....:.::     .|.:..|:..:.|       :.:.
plant   265 DGIAQWCQDLFITKDAQLEKYF-TKDVFSDLEVHQI-----NRPIKPLIVVIIW-------LGFL 316

  Fly   348 VITSLLAANWTAFITALSVLGLFYWLMGQAINKTQISKASNYGSSKSVAK 397
            |........|.:.:.:..::.||.:.:..|....||...|:.....:.||
plant   317 VFGGFKLLQWLSIVASWKIILLFVFFLVIATITMQILIQSSESQRSTPAK 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 117/363 (32%)
LPLAT_LCLAT1-like 75..271 CDD:153252 77/195 (39%)
Acyltransf_C 258..336 CDD:292694 20/77 (26%)
LPAT3NP_175537.1 PLN02380 1..376 CDD:178006 120/375 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 112 1.000 Domainoid score I2059
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10591
Inparanoid 1 1.050 223 1.000 Inparanoid score I1184
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D959325at2759
OrthoFinder 1 1.000 - - FOG0001449
OrthoInspector 1 1.000 - - mtm1207
orthoMCL 1 0.900 - - OOG6_103673
Panther 1 1.100 - - O PTHR10983
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1337
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.830

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