DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and LPAT2

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_567052.1 Gene:LPAT2 / 824934 AraportID:AT3G57650 Length:389 Species:Arabidopsis thaliana


Alignment Length:364 Identity:118/364 - (32%)
Similarity:205/364 - (56%) Gaps:16/364 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IALTFFTSGLCINFIQLLMHVFIKPIDKRLFRKLMYYACYSLYSQLIFVSDWYAGSKMTVYMDKE 92
            :.|.||.|||.:|..|.:.:|.|:|:.|..:||:......:|:.:|:::.||:||.|:.|:.|.|
plant    11 LGLLFFISGLAVNLFQAVCYVLIRPLSKNTYRKINRVVAETLWLELVWIVDWWAGVKIQVFADNE 75

  Fly    93 DFEKHAGKEHVLLIMNHKYEIDWLNGWMICEKLGVLGNCKAYAKKAIRYVPIIGWGWWLAEFVFL 157
            .|.: .||||.|::.||:.:||||.||::.::.|.||:..|..||:.:::|:|||..|.:|::||
plant    76 TFNR-MGKEHALVVCNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYLFL 139

  Fly   158 NRNFDQDKTIITEQLKVVFSYPDPTWLLLNAEGTRFTPAKHEASVKFAQERGMTVLKHHLIPRTK 222
            .||:.:|::.:...|:.:..:|.|.||.|..||||||.||.:|:.::|....:.:.::.||||||
plant   140 ERNWAKDESTLKSGLQRLSDFPRPFWLALFVEGTRFTEAKLKAAQEYAASSELPIPRNVLIPRTK 204

  Fly   223 GFTASLAPIRGLCPVIYDINLAYRPTDKTPATMLSLLHGKSVEPHLLMRRIPLEQVPEDEKEAAA 287
            ||.::::.:|...|.|||:.:.. |....|.|||.|..|:....|:.::...::.:||.:...|.
plant   205 GFVSAVSNMRSFVPAIYDMTVTI-PKTSPPPTMLRLFKGQPSVVHVHIKCHSMKDLPESDDAIAQ 268

  Fly   288 WLQNLFVEKDKIIDSFLETGSFFKTSGIKEVPAYVNK---RRLCSLVNFVCWA-VFSLSCIFYYV 348
            |.::.||.||.::|..:...:|         |....:   |.:.||...:.|| |.:|..| .::
plant   269 WCRDQFVAKDALLDKHIAADTF---------PGQQEQNIGRPIKSLAVVLSWACVLTLGAI-KFL 323

  Fly   349 ITSLLAANWTAFITALSVLGLFYWLMGQAINKTQISKAS 387
            ..:.|.::|.....:...||:....|...|..:|..:::
plant   324 HWAQLFSSWKGITISALGLGIITLCMQILIRSSQSERST 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 118/362 (33%)
LPLAT_LCLAT1-like 75..271 CDD:153252 76/195 (39%)
Acyltransf_C 258..336 CDD:292694 17/80 (21%)
LPAT2NP_567052.1 PLN02380 1..375 CDD:178006 118/364 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 112 1.000 Domainoid score I2059
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10591
Inparanoid 1 1.050 223 1.000 Inparanoid score I1184
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D959325at2759
OrthoFinder 1 1.000 - - FOG0001449
OrthoInspector 1 1.000 - - mtm1207
orthoMCL 1 0.900 - - OOG6_103673
Panther 1 1.100 - - O PTHR10983
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1337
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.830

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