DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and Lpcat2b

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_081875.1 Gene:Lpcat2b / 70902 MGIID:1918152 Length:516 Species:Mus musculus


Alignment Length:394 Identity:68/394 - (17%)
Similarity:128/394 - (32%) Gaps:152/394 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KNSFVIKMGSLEKLKQLRLIHLCIALTFFTSGLCIN---FIQLLMHVF-----IKPIDKRLFRKL 61
            :|..:.::.|..|..|:.:         |..|||.|   .:...:..|     ::|:..|....|
Mouse   195 RNEILRRVKSKMKWPQILI---------FPEGLCTNRSCLVTFKLGAFSPGVPVQPVLLRYPNSL 250

  Fly    62 -----------MYYACYSLYSQLI------FVSDWYAGSKMTVYMDKEDFEK------------- 96
                       .:..|....|||.      |         |.||:..|:.:|             
Mouse   251 DTVTWTWNGFSGFQVCMLTLSQLFTRVEVEF---------MPVYIPSEEEKKDPILFANTVRIKM 306

  Fly    97 ----------HAGKEHVLLI------------------MNHKYEIDWLN---------GWMICEK 124
                      |:.::..|:|                  ::.|.::||.|         .:.:..|
Mouse   307 ANALKLPVTDHSLEDCKLMISAGALQLPMEAGLVEFTKISQKLKLDWDNIHKHLDQYASFAVSSK 371

  Fly   125 LGVLGNCKAYAKKAIRYVPIIGWGWWLAEFVFLNRNFDQDKTIITEQLKVVFSYPDPTWLLLNAE 189
            .|.:| .:|::    ||:                      |..|:|.|:.:||..|     .|.:
Mouse   372 GGKIG-IEAFS----RYL----------------------KLPISEPLRQLFSLFD-----RNQD 404

  Fly   190 GTRFTPAKHEASVKFAQ-ERGMTVLKHHLIPRTKGFTASLAPIRGLCPVIYDINLAYRPTDKTPA 253
            ||          :.|.: ..|:|||.:         .::...|..:...::|::.....|::...
Mouse   405 GT----------IDFREYVIGLTVLCN---------PSNTEKILQMSFKLFDLDEDGYVTERELT 450

  Fly   254 TMLSLLHGKSVEPHLLMRRIPLEQVPEDEKEAAAWLQNLFVEKD----KIIDSFLETGSFFKTSG 314
            |||....|   .|.|.:..:..:...:|..:.:......|..|.    |:..|:::..:.:..|.
Mouse   451 TMLQAAFG---VPDLDVSTLFQQMAGKDSDQVSYRTFRRFALKHPAYAKLFHSYIDLQAAYIYSL 512

  Fly   315 IKEV 318
            .:||
Mouse   513 PREV 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 64/376 (17%)
LPLAT_LCLAT1-like 75..271 CDD:153252 43/246 (17%)
Acyltransf_C 258..336 CDD:292694 11/65 (17%)
Lpcat2bNP_081875.1 PlsC 65..307 CDD:223282 23/129 (18%)
LPLAT_LPCAT1-like 111..323 CDD:153253 24/145 (17%)
HXXXXD motif 142..147
EFh 392..454 CDD:238008 17/85 (20%)
EF-hand_7 392..453 CDD:290234 16/84 (19%)
EFh 429..487 CDD:298682 9/60 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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