DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Agpat3 and Agpat4

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_006523408.3 Gene:Agpat4 / 68262 MGIID:1915512 Length:458 Species:Mus musculus


Alignment Length:381 Identity:150/381 - (39%)
Similarity:229/381 - (60%) Gaps:25/381 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LKQLRLIHLCIALTFFTSGLCINFIQLLMHVFIKPIDKRLFRKLMYYACYSLYSQLIFVSDWYAG 82
            ||...|.||.....|..|||.:|.|||...| |.||:|:||||:....||.:.|||:.:.:|::|
Mouse    87 LKSQFLCHLVFCYVFIASGLIVNAIQLCTLV-IWPINKQLFRKINARLCYCVSSQLVMLLEWWSG 150

  Fly    83 SKMTVYMDKEDFEKHAGKEHVLLIMNHKYEIDWLNGWMICEKLGVLGNCKAYAKKAIRYVPIIGW 147
            ::.|:|.|.:.. .|.|||:.::::|||:|||:|.||.:.|:||:|||.|..|||.:.|||||||
Mouse   151 TECTIYTDPKAC-PHYGKENAIVVLNHKFEIDFLCGWSLAERLGILGNSKVLAKKELAYVPIIGW 214

  Fly   148 GWWLAEFVFLNRNFDQDKTIITEQLKVVFSYPDPTWLLLNAEGTRFTPAKHEASVKFAQERGMTV 212
            .|:..|.:|..|.::||:..:.:.|..:..||:....|::.||||||..||:.|::.||.:|:..
Mouse   215 MWYFVEMIFCTRKWEQDRQTVAKSLLHLRDYPEKYLFLIHCEGTRFTEKKHQISMQVAQAKGLPS 279

  Fly   213 LKHHLIPRTKGFTASLAPIRGLCPVIYDINLAYRPTDKTPATMLSLLHGKSVEPHLLMRRIPLEQ 277
            |||||:||||||..::..:|.:.|.:||..|.:| .::.| |:|.:|:||.......:||||:|.
Mouse   280 LKHHLLPRTKGFAITVKCLRDVVPAVYDCTLNFR-NNENP-TLLGVLNGKKYHADCYVRRIPMED 342

  Fly   278 VPEDEKEAAAWLQNLFVEKDKIIDSFLETGSFFKTSGIKEVPAYVNKRRLCSLVNFVCWAVFSLS 342
            :||||.:.:|||..|:.|||...:.:..||.|      .|.| :|..||..||||::.||...|.
Mouse   343 IPEDEDKCSAWLHKLYQEKDAFQEEYYRTGVF------PETP-WVPPRRPWSLVNWLFWASLLLY 400

  Fly   343 CIFYYVITSLLAANWTAFITALSVLGLF-------YWLMGQAINKTQISKASNYGS 391
            ..|.::::.:.:.   :.:|..|::.:|       .|::|    .|:|.|.|.||:
Mouse   401 PFFQFLVSMVSSG---SSVTLASLVLIFCMASMGVRWMIG----VTEIDKGSAYGN 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 145/370 (39%)
LPLAT_LCLAT1-like 75..271 CDD:153252 80/195 (41%)
Acyltransf_C 258..336 CDD:292694 31/77 (40%)
Agpat4XP_006523408.3 PLN02380 100..406 CDD:178006 134/316 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848229
Domainoid 1 1.000 125 1.000 Domainoid score I5440
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 289 1.000 Inparanoid score I2791
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51956
OrthoDB 1 1.010 - - D482283at33208
OrthoFinder 1 1.000 - - FOG0001449
OrthoInspector 1 1.000 - - mtm8818
orthoMCL 1 0.900 - - OOG6_103673
Panther 1 1.100 - - LDO PTHR10983
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3473
SonicParanoid 1 1.000 - - X1337
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.800

Return to query results.
Submit another query.