DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and Aup1

DIOPT Version :10

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001073368.1 Gene:Aup1 / 680423 RGDID:1591777 Length:410 Species:Rattus norvegicus


Alignment Length:394 Identity:67/394 - (17%)
Similarity:115/394 - (29%) Gaps:164/394 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LCIALTFFTS-GLCINFIQLL--MHVFIKPI---DKRLFRKLMYYACYSLYSQLIFVSDWYAGSK 84
            |.:||..:.. |||:..::|.  :|||:...   |..|.|.::...|..|              .
  Rat    24 LLLALLLYAPVGLCLLVLRLFLGLHVFLVSCALPDSVLRRFVVRTMCAVL--------------G 74

  Fly    85 MTVYMDKEDFEKHAGKEHVLLIMNHKYEID-----------------------WLNGWM-ICEKL 125
            :....:......|..:   :||.||....|                       |..|:| :..::
  Rat    75 LVARQEDSGLRDHRVR---VLISNHVTPFDHNIVNLLTTCSTPLLNSPPSFVCWSRGFMEMDRRV 136

  Fly   126 GVLGNCKAY-AKKAIRYVPII------------------GWGWWLAEFVFLNRNFDQDKTIITEQ 171
            .::.:.|.: |...:...|::                  .|.:.:.:.|       |..|:..::
  Rat   137 ELVESLKKFCASTRLPPTPLLLFPEEEATNGREGLLRFSSWPFSIQDVV-------QPLTLQVQR 194

  Fly   172 LKVVFSYPDPTWL--LL-------------------------NAE----------------GTRF 193
            ..|..:..|.:|:  ||                         |.|                |||.
  Rat   195 PLVSVTVSDASWVSELLWSLFVPFTVYQVRWLHPIRRQLGEENEEFALRVQQLVAKELGQIGTRL 259

  Fly   194 TPAKHEASVKFAQERGMTVLKHHLIPRTKGFTASLAPIRGLCPVIYDINLAYRPTDKTPAT--ML 256
            |||.....:|         .:.|...|.:...:|.                  |:..:|::  .|
  Rat   260 TPADKAEHMK---------RQRHPRLRPQSVQSSF------------------PSPPSPSSDVQL 297

  Fly   257 SLL--HGKSVEPHLLMRRIPLEQVPEDEKEAAAWLQNLFVEKDKIIDSFLETGSFFK----TSGI 315
            ::|  ..|.|.||     :||..:..|......        .|..|.:.||....|.    |.|.
  Rat   298 TILAQRVKEVLPH-----VPLNVIQRDLARTGC--------VDLTITNLLEGAVAFMPEDVTEGS 349

  Fly   316 KEVP 319
            :.:|
  Rat   350 QSLP 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 67/394 (17%)
Aup1NP_001073368.1 LPLAT 66..264 CDD:473073 31/221 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..293 9/60 (15%)
CUE_AUP1 300..340 CDD:270603 12/52 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..367 2/6 (33%)

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