DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and Aup1

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001073368.1 Gene:Aup1 / 680423 RGDID:1591777 Length:410 Species:Rattus norvegicus


Alignment Length:394 Identity:67/394 - (17%)
Similarity:115/394 - (29%) Gaps:164/394 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LCIALTFFTS-GLCINFIQLL--MHVFIKPI---DKRLFRKLMYYACYSLYSQLIFVSDWYAGSK 84
            |.:||..:.. |||:..::|.  :|||:...   |..|.|.::...|..|              .
  Rat    24 LLLALLLYAPVGLCLLVLRLFLGLHVFLVSCALPDSVLRRFVVRTMCAVL--------------G 74

  Fly    85 MTVYMDKEDFEKHAGKEHVLLIMNHKYEID-----------------------WLNGWM-ICEKL 125
            :....:......|..:   :||.||....|                       |..|:| :..::
  Rat    75 LVARQEDSGLRDHRVR---VLISNHVTPFDHNIVNLLTTCSTPLLNSPPSFVCWSRGFMEMDRRV 136

  Fly   126 GVLGNCKAY-AKKAIRYVPII------------------GWGWWLAEFVFLNRNFDQDKTIITEQ 171
            .::.:.|.: |...:...|::                  .|.:.:.:.|       |..|:..::
  Rat   137 ELVESLKKFCASTRLPPTPLLLFPEEEATNGREGLLRFSSWPFSIQDVV-------QPLTLQVQR 194

  Fly   172 LKVVFSYPDPTWL--LL-------------------------NAE----------------GTRF 193
            ..|..:..|.:|:  ||                         |.|                |||.
  Rat   195 PLVSVTVSDASWVSELLWSLFVPFTVYQVRWLHPIRRQLGEENEEFALRVQQLVAKELGQIGTRL 259

  Fly   194 TPAKHEASVKFAQERGMTVLKHHLIPRTKGFTASLAPIRGLCPVIYDINLAYRPTDKTPAT--ML 256
            |||.....:|         .:.|...|.:...:|.                  |:..:|::  .|
  Rat   260 TPADKAEHMK---------RQRHPRLRPQSVQSSF------------------PSPPSPSSDVQL 297

  Fly   257 SLL--HGKSVEPHLLMRRIPLEQVPEDEKEAAAWLQNLFVEKDKIIDSFLETGSFFK----TSGI 315
            ::|  ..|.|.||     :||..:..|......        .|..|.:.||....|.    |.|.
  Rat   298 TILAQRVKEVLPH-----VPLNVIQRDLARTGC--------VDLTITNLLEGAVAFMPEDVTEGS 349

  Fly   316 KEVP 319
            :.:|
  Rat   350 QSLP 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 67/394 (17%)
LPLAT_LCLAT1-like 75..271 CDD:153252 41/285 (14%)
Acyltransf_C 258..336 CDD:292694 16/68 (24%)
Aup1NP_001073368.1 LPLAT 66..264 CDD:302626 31/221 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..293 9/60 (15%)
CUE_AUP1 300..340 CDD:270603 12/52 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..367 2/6 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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