DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and Lpgat1

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_038947017.1 Gene:Lpgat1 / 679692 RGDID:1585897 Length:407 Species:Rattus norvegicus


Alignment Length:354 Identity:80/354 - (22%)
Similarity:126/354 - (35%) Gaps:95/354 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 YACYSLYSQLIFVSD-----------------------WYAGSKMTVYMDKEDFEKHAGKEHVLL 105
            |.||.:..|.:.|.|                       ||||  .||....||. |...|:..::
  Rat    73 YICYIIILQPLRVLDSKRFWYIEGLMYKWLLGMVASWGWYAG--YTVMEWGEDI-KAIAKDEAVM 134

  Fly   106 IMNHKYEIDWLNGWMICEKLGVLGNCKAYAKKAIRYVPIIGWGWWLAEFVFLNRNF--------- 161
            ::||:...|.....|..:..|                |::....||.:.:|...||         
  Rat   135 LVNHQATGDVCTLMMCLQDKG----------------PVVAQMMWLMDHIFKYTNFGIVSLIHGD 183

  Fly   162 ----------DQDKTIITEQLKVVFSYPDPTWLLLNAEGTRFTPAKHEASVKFAQERGMTVLKHH 216
                      ||...::.:.|:..:...|..|::|..|| .|...:.|.|..||::..:..|.|.
  Rat   184 FFIRQGRAYRDQQLLVLKKHLEHNYRSRDRKWIVLFPEG-GFLRKRRETSQAFAKKNNLPFLTHV 247

  Fly   217 LIPRTKGFTASLAPI--------------RGL-CPV-----IYDINLAYRPTDKTPATMLSLLHG 261
            .:||.......|..:              ||| |..     |.|..:||...:........|.:.
  Rat   248 TLPRFGATNIILKALVARQENGSPAGGDARGLECKSRGLQWIIDTTIAYPKAEPIDIQTWILGYR 312

  Fly   262 KSVEPHLLMRRIPLEQVPEDEKEAAAWLQNLFVEKDKIIDSFLETGSFFKTSGIKEVPAYVNKRR 326
            |....|:..|..|:..||.:.::...||...|:||:.::..|.:||:|....|.||..:     |
  Rat   313 KPTVTHVHYRIFPIADVPLETEDLTNWLYQRFIEKEDLLSHFYKTGAFPPPQGQKEAVS-----R 372

  Fly   327 LCSLVNFVCWAV------FSLSCIFYYVI 349
            ..:|.|  .|.:      |....::|:||
  Rat   373 AMTLSN--VWILLIQSFAFLSGYLWYHVI 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 80/354 (23%)
LPLAT_LCLAT1-like 75..271 CDD:153252 52/257 (20%)
Acyltransf_C 258..336 CDD:292694 22/77 (29%)
Lpgat1XP_038947017.1 LPLAT_LCLAT1-like 106..322 CDD:153252 50/235 (21%)
Acyltransf_C 311..>366 CDD:406475 15/54 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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