DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and agpat3

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001008119.1 Gene:agpat3 / 493481 XenbaseID:XB-GENE-969507 Length:376 Species:Xenopus tropicalis


Alignment Length:391 Identity:156/391 - (39%)
Similarity:245/391 - (62%) Gaps:22/391 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 MGSLEKLKQLRLIHLCIALTFFTSGLCINFIQLLMHVFIKPIDKRLFRKLMYYACYSLYSQLIFV 76
            ||....||...::||.|...|..|||.|||:||.. :.:..|:|.|:|::.....|.|:|||:.:
 Frog     1 MGFWGFLKTQFVVHLLIGFVFVVSGLIINFLQLCT-LPLWGINKPLYRRVNCRMSYLLWSQLVML 64

  Fly    77 SDWYAGSKMTVYMDKEDFEKHAGKEHVLLIMNHKYEIDWLNGWMICEKLGVLGNCKAYAKKAIRY 141
            .:|::|::.|::.|:|..: |.|||||::|:||.||||:|.||.:||:.||||:.|..|||.:..
 Frog    65 LEWWSGTQCTLFTDQETID-HFGKEHVIIILNHNYEIDFLCGWTMCERYGVLGSSKVLAKKELLM 128

  Fly   142 VPIIGWGWWLAEFVFLNRNFDQDKTIITEQLKVVFSYPDPTWLLLNAEGTRFTPAKHEASVKFAQ 206
            ||:|||.|:..|.||..|.:::|:.::.:.|:.:..||:..|.||..||||||..||:.|::.|.
 Frog   129 VPLIGWTWYFLEIVFCKRKWEEDRDMVIQGLRNLRDYPEYMWFLLYCEGTRFTETKHKISMEVAD 193

  Fly   207 ERGMTVLKHHLIPRTKGFTASLAPIRGLCPVIYDINLAYRPTDKTPATMLSLLHGKSVEPHLLMR 271
            ::|:..|||||:|||:|||.::..:||....:||:.|.:| .:|.| ::|.:|:||..|..:.:|
 Frog   194 KKGLARLKHHLLPRTRGFTTAVQCLRGTVSAVYDVTLNFR-GNKNP-SLLGILYGKKYEADMCVR 256

  Fly   272 RIPLEQVPEDEKEAAAWLQNLFVEKDKIIDSFLETGSFFKTSGIKEVPAYVNKRRLCSLVNFVCW 336
            |.|||::||||::||.||..|:.|||.:.:.:::.|:|   .|.:.||    .||..:|:||:.|
 Frog   257 RFPLEEIPEDEQKAADWLHKLYQEKDALQEQYIQEGTF---PGTQIVP----PRRPWTLLNFLFW 314

  Fly   337 AVFSLSCIFYYVITSLLAANWTAFITALSVLGLFYWLMGQAINK----TQISKASNYGS---SKS 394
            |...||.:|.:.| .:.|:.....|  ||.:| |.|....|:.:    |:|.:.|:||:   .||
 Frog   315 ATLLLSPLFSFAI-GIFASGSPLLI--LSFMG-FMWTASFAVRRLIGVTEIERGSSYGNHEVKKS 375

  Fly   395 V 395
            :
 Frog   376 I 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 147/367 (40%)
LPLAT_LCLAT1-like 75..271 CDD:153252 83/195 (43%)
Acyltransf_C 258..336 CDD:292694 31/77 (40%)
agpat3NP_001008119.1 PLN02380 12..366 CDD:178006 147/368 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 129 1.000 Domainoid score I5185
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H10591
Inparanoid 1 1.050 288 1.000 Inparanoid score I2761
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D482283at33208
OrthoFinder 1 1.000 - - FOG0001449
OrthoInspector 1 1.000 - - mtm9482
Panther 1 1.100 - - O PTHR10983
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1337
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.160

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