DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and gpat3

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001002685.1 Gene:gpat3 / 436958 ZFINID:ZDB-GENE-040718-436 Length:449 Species:Danio rerio


Alignment Length:199 Identity:38/199 - (19%)
Similarity:67/199 - (33%) Gaps:74/199 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LKQLRLIHLCIALTFFTSGLCI----------NFIQLLMHVFIKPIDKRLFRKLMYYACYSLYSQ 72
            |..||:....|.|::...|..:          |::..|:|:                .||.:.::
Zfish   165 LLPLRITLAVIGLSWLVIGTTLVGFLPNSKVKNWLSDLVHI----------------TCYRICAR 213

  Fly    73 LIFVSDWYAGSKMTV-YMDKEDFEKHAGKEHVLLIMNHKYEIDWLNGWMICEKLGVLGNCKAYA- 135
                     |...|: |.:||:..|..|    :.:.||...||          :.:|.|...|| 
Zfish   214 ---------GLSATIRYHNKENRPKKGG----ICVANHTSPID----------IVILANDGCYAM 255

  Fly   136 -------------KKAIRYVPIIGWGWWLAEFVFLNRNFDQDKTIITEQLKVVFSYPDPTWLLLN 187
                         :..:|..|          .|:..|:..:|:..:.::||...|......:|:.
Zfish   256 VGQVHGGLMGVIQRSMVRSCP----------HVWFERSEMKDRHAVAKRLKDHISDKTKLPILIF 310

  Fly   188 AEGT 191
            .|||
Zfish   311 PEGT 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 35/194 (18%)
LPLAT_LCLAT1-like 75..271 CDD:153252 27/132 (20%)
Acyltransf_C 258..336 CDD:292694
gpat3NP_001002685.1 LPLAT_LPCAT1-like 208..417 CDD:153253 28/140 (20%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q9D517 238..243 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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