DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and Agpat1

DIOPT Version :10

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_063135419.1 Gene:Agpat1 / 406165 RGDID:1303287 Length:322 Species:Rattus norvegicus


Alignment Length:306 Identity:60/306 - (19%)
Similarity:107/306 - (34%) Gaps:113/306 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LRLIHLCIALTFFTSGLCINFIQ--------LLMHVFIKPI---------DKRLFRKLMYYACYS 68
            |.|:.|.::..:|.|.....|.:        |.:.:...|:         :.::.|.|:.:..| 
  Rat    50 LLLLLLLLSTLWFCSSSAKYFFKMAFYNGWILFLAILAIPVCAVRGRNVENMKILRLLLLHVKY- 113

  Fly    69 LYSQLIFVSDWYAGSKMTVYMDKEDFEKHAGKEH------VLLIMNHKYEIDWLNGWMICEKLGV 127
            ||           |.::.|          .|.:|      .:::.||:..:|.|.      .:.|
  Rat   114 LY-----------GIRVEV----------RGAQHFPPTQPYVVVSNHQSSLDLLG------MMEV 151

  Fly   128 L-GNCKAYAKKAIRYVPIIGWGWWLAEFVFLNRNFDQD---------KTIITEQLKVVFSYPDPT 182
            | ..|...||:.:.:....|...|||..:|::|....|         :|::|:.::|        
  Rat   152 LPDRCVPIAKRELLWAGSAGLACWLAGVIFIDRKRTGDAISVMSEVAQTLLTQDVRV-------- 208

  Fly   183 WLLLNAEGTRFTPAKHEASVKFAQERG----------------MTVLKHHLIPRTKGFTASLAPI 231
            |:.  .||||    .|..|: ...:||                |:..:.....:.:.||:....:
  Rat   209 WVF--PEGTR----NHNGSM-LPFKRGAFHLAVQAQVPIVPIVMSSYQDFYCKKERRFTSGRCQV 266

  Fly   232 RGLCPVIYDINLAYRPT-----DKTPA-------TMLSLLHGKSVE 265
            |.|.||         ||     |..||       :||::....|.:
  Rat   267 RVLPPV---------PTEGLTPDDVPALADRVRHSMLTIFREISTD 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 59/304 (19%)
Agpat1XP_063135419.1 None

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