DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and Lclat1

DIOPT Version :10

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001418858.1 Gene:Lclat1 / 362702 RGDID:1565906 Length:376 Species:Rattus norvegicus


Alignment Length:388 Identity:99/388 - (25%)
Similarity:172/388 - (44%) Gaps:48/388 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KQLRLIHLCIALTFFTSGLCINFIQLLMHVF-IKPIDKRLFRKLMYYACYSLYSQLIFVSDWYA- 81
            |.:..|....|.:||.|            :| :.||...:|..|.:|...|  |:|  |:.|.. 
  Rat     5 KGIYFILFLFAGSFFGS------------IFMLGPILPLMFINLSWYRWIS--SRL--VAMWLTL 53

  Fly    82 ---------GSKMTVYMDKEDFEKHAGKEHVLLIMNHKYEIDWLNGWMICEKLGVLGNCKAYAKK 137
                     |.|:.:..|     .....|..::||||:..:||:..|....:...|...|...|.
  Rat    54 PVALLETMFGVKVVITGD-----AFVPGERSVIIMNHRTRVDWMFLWNCLMRYSYLRLEKICLKS 113

  Fly   138 AIRYVPIIGWGWWLAEFVFLNRNFDQDKTIITEQLKVVFSYPDPTWLLLNAEGTRFTPAKHEASV 202
            :::.||..||...:|.|:|::|.:..||:...:.:....:..:|..||:..|||..|......|.
  Rat   114 SLKSVPGFGWAMQVAAFIFIHRKWKDDKSHFEDMVDYFCAIHEPLQLLIFPEGTDLTENNKARSN 178

  Fly   203 KFAQERGMTVLKHHLIPRTKGFTASLAPIRGL--CPVIYDINLAYRPTDKTPATMLSLLHGK-SV 264
            .||::.|:...::.|.|||.|||..:..:|..  ...::||.:|| |.: .|.|...||.|. ..
  Rat   179 DFAEKNGLQKYEYVLHPRTTGFTFVVDRLRERRNLDAVHDITVAY-PYN-IPQTEKHLLLGDFPK 241

  Fly   265 EPHLLMRRIPLEQVPEDEKEAAAWLQNLFVEKDKIIDSFLETGSFFKTSGIKEVPAYVNKRR--L 327
            |.|..:.|.|::.:|..:::...|....:.||::.:.||.:....|..:|...||...::.|  :
  Rat   242 EIHFHVHRYPVDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFHFTGQSTVPPCKSELRVLV 306

  Fly   328 CSLVNFVCWAVF-SLSCIFYYVITSLLAANWTAFITALSVLGLFYWLMGQAINKTQISKASNY 389
            ..|::.:.||:| |..|:..|:.:.:   .| .||.::    :|:.|..:.....:|.:.:.|
  Rat   307 VKLLSILYWALFCSAMCLLIYLYSPV---RW-YFIISI----VFFVLQERIFGGLEIIELACY 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 97/380 (26%)
Lclat1NP_001418858.1 LPLAT_LCLAT1-like 55..248 CDD:153252 55/199 (28%)
Acyltransf_C 233..307 CDD:465006 18/73 (25%)

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