DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and Lpcat1

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001094205.1 Gene:Lpcat1 / 361467 RGDID:1311599 Length:534 Species:Rattus norvegicus


Alignment Length:521 Identity:99/521 - (19%)
Similarity:163/521 - (31%) Gaps:225/521 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KNSFV--IKMGSLEKLKQLRLIHLCIALTFFTSGLCI-NFIQLLMHVF-----IKPIDKR----- 56
            :|.||  :::.:|:|.:.     ..:.||.|...|.. .|:.||...|     :.|.||.     
  Rat    29 RNPFVHELRLSALQKAQV-----AFMTLTLFPIRLLFAAFMMLLAWPFALVASLGPPDKEPEQPL 88

  Fly    57 -LFRKLMYYACYSLYSQLIFVSDWYAGSKMTVYMDKEDFEKHAGKEH--------VLLIMNHKYE 112
             |:||::.:...::...:     |:||.          |.:.|.|..        :|.:..|...
  Rat    89 ALWRKVVDFLLKAIMRTM-----WFAGG----------FHRVAVKGRQALPTEAAILTLAPHSSY 138

  Fly   113 IDWLNGWMICEKLGVLGNCKAYAKKAIRYVPIIGWGWWLAEF--VFLNRNFDQD---KTIITEQL 172
            .|.:...|....:        ..|...|.:||  ||..:...  ||::|: |||   ||:  |::
  Rat   139 FDAIPVTMTMSSI--------VMKAESRDIPI--WGTLIRYIRPVFVSRS-DQDSRRKTV--EEI 190

  Fly   173 K------------------------------------------VVFSYPDP-------------- 181
            |                                          ||..||:.              
  Rat   191 KRRAQSNGKWPQIMIFPEGTCTNRTCLITFKPGAFIPGVPVQPVVLRYPNKLDTITWTWQGPGAL 255

  Fly   182 --TWLLL----------------NAEGTRFTPAKHEASVK--FAQERGMTVLKHHLIPRTKGFTA 226
              .||.|                .:|..:..||.:.::|:  .|:..|::|..:           
  Rat   256 KILWLTLCQFQNQVEIEFLPVYCPSEEEKRNPALYASNVRRVMAKALGVSVTDY----------- 309

  Fly   227 SLAPIRGLCPVIYDINLAYR------PTDKTPATMLSLLHGKSVEPHLLMRRIPLEQVPEDEK-- 283
                      ...|..||..      |.|........|:.|..::|..|.:  .|::..|..:  
  Rat   310 ----------TFEDCQLALAEGQLRLPADTCLLEFARLVRGLGLKPENLEK--DLDKYSESARMK 362

  Fly   284 --------EAAAWLQNLFVEKDKIIDSFLETGSFFKTSGIKEVPAYVNKRRLCSLVNFVC----- 335
                    |.||:|:  ....|.:.|.|    |.|..||..|    ::.|.....::.||     
  Rat   363 RGEKIRLPEFAAYLE--VPVSDALEDMF----SLFDESGGGE----IDLREYVVALSVVCRPSQT 417

  Fly   336 -------WAVF-----------SLSCIFYYVITSLLAANWTAF-ITALSVLGLFYWLMGQAINKT 381
                   :.::           .||||..           ||. |:.|:|..||     |||::.
  Rat   418 LATIQLAFKMYGSPEDGSIDEADLSCILK-----------TALGISELTVTDLF-----QAIDQE 466

  Fly   382 Q 382
            :
  Rat   467 E 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 94/501 (19%)
LPLAT_LCLAT1-like 75..271 CDD:153252 49/290 (17%)
Acyltransf_C 258..336 CDD:292694 21/99 (21%)
Lpcat1NP_001094205.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
PlsC 59..>242 CDD:223282 40/210 (19%)
LPLAT_LPCAT1-like 103..314 CDD:153253 40/259 (15%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 135..140 1/4 (25%)
EFh <350..412 CDD:298682 15/73 (21%)
EFh 384..446 CDD:298682 14/69 (20%)
EF-hand_7 421..479 CDD:290234 14/63 (22%)
EF-hand_8 432..483 CDD:290545 14/52 (27%)
Di-lysine motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 531..534
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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