DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and lpcat4

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_991122.2 Gene:lpcat4 / 327566 ZFINID:ZDB-GENE-030131-5777 Length:508 Species:Danio rerio


Alignment Length:129 Identity:30/129 - (23%)
Similarity:44/129 - (34%) Gaps:51/129 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 RTKGFTASLAPIRGLCPVIYDINLAYRPTDKTPATMLSLLHG-------------KSVEPHLLM- 270
            :.||.||.        |.|:::||          |.|..:.|             .:|...||| 
Zfish     3 KNKGQTAH--------PFIHEVNL----------TALQRIQGLVLGVFLFPVRITLAVLFFLLMW 49

  Fly   271 --RRIPLEQVPEDEK--EAAAWLQNLFVEKDKIIDSFLETGSFF-----------KTSGIKEVP 319
              .|:.|..:||..:  ....|.:.||..    :..||....||           :.:|:||.|
Zfish    50 PIARLRLAGLPESRRAEPVRGWRRWLFHH----VMVFLSRAVFFCVGFLWVRVKGRQAGLKEAP 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 30/129 (23%)
LPLAT_LCLAT1-like 75..271 CDD:153252 15/66 (23%)
Acyltransf_C 258..336 CDD:292694 20/91 (22%)
lpcat4NP_991122.2 PlsC 42..305 CDD:223282 19/72 (26%)
LPLAT_LPCAT1-like 85..291 CDD:153253 6/25 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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