DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and Agpat2

DIOPT Version :10

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001101291.1 Gene:Agpat2 / 311821 RGDID:1309229 Length:278 Species:Rattus norvegicus


Alignment Length:249 Identity:55/249 - (22%)
Similarity:89/249 - (35%) Gaps:87/249 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FVIKMGSLEKLKQLRLIHLCIALTFFTSGLCINFIQLLMHVFIKPIDKRLFRKLMYYACYSLYSQ 72
            |.:|:|       |..: ||::.:...|.:|     ||.|.. :.:|.                 
  Rat    26 FYVKVG-------LYCV-LCLSFSAAASIVC-----LLRHGG-RTVDN----------------- 59

  Fly    73 LIFVSDWYAGSKMTVYMDKEDFEKHAGKE-----HVLLIMNHKYEIDWLNGWMICEKLGVLGNCK 132
             :.:..|:..|...||..:  ||....|:     ..::|.||:..:|.:....|..|     .|.
  Rat    60 -MSIISWFVRSFKYVYGLR--FEVSGQKKLEVDGPCVIISNHQSILDMMGLMEILPK-----RCV 116

  Fly   133 AYAKKAIRYVPIIGWGWWLAEFVFLNRNFDQDKT-----------IITEQLKVVFSYPDPTWLLL 186
            ..||:.:.:...:|...:|....|:||  .|.||           ::.|.|| |:.||       
  Rat   117 QIAKRELMFTGPVGLIMYLGGVYFINR--QQAKTAMSLMADLGDLMVKENLK-VWIYP------- 171

  Fly   187 NAEGTRFTPAKHEASVKFAQERGMTVLKHHLIPRTKG-FTASLAPIRGLCPVIY 239
              ||||             .:.|      .|:|..|| |..::.....:.||:|
  Rat   172 --EGTR-------------NDNG------DLLPFKKGAFYLAIQAQVPIIPVVY 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 51/234 (22%)
Agpat2NP_001101291.1 PlsC 62..261 CDD:439974 43/181 (24%)

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