DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and Lpgat1

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001128301.1 Gene:Lpgat1 / 226856 MGIID:2446186 Length:409 Species:Mus musculus


Alignment Length:349 Identity:79/349 - (22%)
Similarity:129/349 - (36%) Gaps:85/349 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 YACYSLYSQLIFVSD-----------------------WYAGSKMTVYMDKEDFEKHAGKEHVLL 105
            |.||.:..|.:.|.|                       ||||  .||....||. |...|:..::
Mouse    75 YICYVIILQPLRVLDSKRFWYIEGLMYKWLLGMVASWGWYAG--YTVMEWGEDI-KAIAKDEAVM 136

  Fly   106 IMNHKYEIDWLNGWMICEKLGVLGNCKAYAKKAIRYVPIIGWGWWLAEFVFLNRNF--------- 161
            ::||:...|.....|..:..|                |::....||.:.:|...||         
Mouse   137 LVNHQATGDVCTLMMCLQDKG----------------PVVAQMMWLMDHIFKYTNFGIVSLIHGD 185

  Fly   162 ----------DQDKTIITEQLKVVFSYPDPTWLLLNAEGTRFTPAKHEASVKFAQERGMTVLKHH 216
                      ||...::.:.|:..:...|..|::|..|| .|...:.|.|..||::..:..|.|.
Mouse   186 FFIRQGRAYRDQQLLVLKKHLEHNYRSRDRKWIVLFPEG-GFLRKRRETSQAFAKKNNLPFLTHV 249

  Fly   217 LIPRTKGFTASLAPI--------------RGL-CPV-----IYDINLAYRPTDKTPATMLSLLHG 261
            .:||.......|..:              ||| |..     |.|..:||...:........|.:.
Mouse   250 TLPRFGATNIILKALVARQENGSPAGGDARGLECKSRGLQWIIDTTIAYPKAEPIDIQTWILGYR 314

  Fly   262 KSVEPHLLMRRIPLEQVPEDEKEAAAWLQNLFVEKDKIIDSFLETGSFFKTSGIKEVPAYVNKRR 326
            |....|:..|..|:..||.:.::..:||...|:||:.::..|.:||:|....|.||  |...:..
Mouse   315 KPTVTHVHYRIFPIGDVPLETEDLTSWLYQRFIEKEDLLSHFYKTGAFPPPQGQKE--AVCREMT 377

  Fly   327 LCSLVNFVCWAVFSLS-CIFYYVI 349
            |.::..|:..:...|| .::|::|
Mouse   378 LSNMWIFLIQSFAFLSGYLWYHII 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 79/349 (23%)
LPLAT_LCLAT1-like 75..271 CDD:153252 52/257 (20%)
Acyltransf_C 258..336 CDD:292694 22/77 (29%)
Lpgat1NP_001128301.1 LPLAT_LCLAT1-like 108..324 CDD:153252 50/235 (21%)
Acyltransf_C 313..382 CDD:374349 20/70 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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