DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and Lclat1

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_036016461.1 Gene:Lclat1 / 225010 MGIID:2684937 Length:492 Species:Mus musculus


Alignment Length:407 Identity:102/407 - (25%)
Similarity:178/407 - (43%) Gaps:57/407 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VIKMGSLEKL---------KQLRLIHLCIALTFFTSGLCINFIQLLMHVF-IKPIDKRLFRKLMY 63
            |::.|...:|         |.:..|....|.:||.|            :| :.||...:|..|.:
Mouse   102 VLQTGRFRELWLSRIMVSWKGIYFILFLFAGSFFGS------------IFMLGPILPLMFINLSW 154

  Fly    64 YACYSLYSQLIFVSDWYA----------GSKMTVYMDKEDFEKHAGKEHVLLIMNHKYEIDWLNG 118
            |...|  |:|  |:.|..          |.::.:..|     .....|..::||||:..:||:..
Mouse   155 YRWIS--SRL--VATWLTLPVALLETMFGVRVVITGD-----AFVPGERSVIIMNHRTRVDWMFL 210

  Fly   119 WMICEKLGVLGNCKAYAKKAIRYVPIIGWGWWLAEFVFLNRNFDQDKTIITEQLKVVFSYPDPTW 183
            |....:...|...|...|.:::.||..||...:|.|:|::|.:..||:...:.:....:..:|..
Mouse   211 WNCLMRYSYLRVEKICLKSSLKSVPGFGWAMQVAAFIFIHRKWKDDKSHFEDMIDYFCAIHEPLQ 275

  Fly   184 LLLNAEGTRFTPAKHEASVKFAQERGMTVLKHHLIPRTKGFTASLAPIR--GLCPVIYDINLAYR 246
            ||:..|||..|......|..||::.|:...::.|.|||.|||..:..:|  .....::||.:|| 
Mouse   276 LLIFPEGTDLTENNKARSNDFAEKNGLQKYEYVLHPRTTGFTFVVDRLREGKNLDAVHDITVAY- 339

  Fly   247 PTDKTPATMLSLLHGK-SVEPHLLMRRIPLEQVPEDEKEAAAWLQNLFVEKDKIIDSFLETGSFF 310
            |.: .|.|...||.|. ..|.|..::|.|.:.:|..:::...|....:.||::.:.||.:....|
Mouse   340 PYN-IPQTEKHLLLGDFPKEIHFHVQRYPADSLPTSKEDLQLWCHRRWEEKEERLRSFYQGEKNF 403

  Fly   311 KTSGIKEVPAYVNKRR--LCSLVNFVCWAVF-SLSCIFYYVITSLLAANWTAFITALSVLGLFYW 372
            ..:|...||...::.|  :..|::.|.||:| |..|:..|:.:.:   .| .||.::    :|:.
Mouse   404 HFTGQSTVPPCKSELRVLVVKLLSIVYWALFCSAMCLLIYLYSPV---RW-YFIISI----VFFV 460

  Fly   373 LMGQAINKTQISKASNY 389
            |..:.....:|.:.:.|
Mouse   461 LQERIFGGLEIIELACY 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 97/380 (26%)
LPLAT_LCLAT1-like 75..271 CDD:153252 56/208 (27%)
Acyltransf_C 258..336 CDD:292694 20/80 (25%)
Lclat1XP_036016461.1 LPLAT_LCLAT1-like 171..364 CDD:153252 54/199 (27%)
Acyltransf_C 349..422 CDD:406475 18/72 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D959325at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3473
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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