DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and acl-1

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_510606.1 Gene:acl-1 / 181671 WormBaseID:WBGene00010339 Length:262 Species:Caenorhabditis elegans


Alignment Length:224 Identity:55/224 - (24%)
Similarity:90/224 - (40%) Gaps:62/224 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FVIKMGSLEKLKQLRLIHLCIALTFFTSGLCI---NFIQLLMHVFIKPIDK------RLFRKLMY 63
            |||.:  |..|.||.:|...|...:|  |:|:   .|:..|..:   |..|      |:|:    
 Worm     8 FVIAV--LLLLAQLPVIGFYIRAVYF--GMCLIIGGFLGGLASI---PFGKSPNNHFRMFK---- 61

  Fly    64 YACYSLYSQLIF-VSDWYAGSKMTVYMDKEDFEKHAGKEHVLLIMNHKYEIDWLN---GWMICEK 124
                      || ...|    .|.|..:..:.|....|:..::|.||:..:|.|.   .|.:   
 Worm    62 ----------IFQAMTW----PMGVRFELRNSEILHDKKPYIIIANHQSALDVLGMSFAWPV--- 109

  Fly   125 LGVLGNCKAYAKKAIRYVPIIGWGWWLAEFVFLNRNFDQDKT----------IITEQLKVVFSYP 179
                 :|....|.:::|:|......:|.:.|::|| |.::|.          |:|::.| |:.||
 Worm   110 -----DCVVMLKSSLKYLPGFNLCAYLCDSVYINR-FSKEKALKTVDTTLHEIVTKKRK-VWIYP 167

  Fly   180 DPTWLLLNAEGTRFTPAKHEASVKFAQER 208
            :.|   .||| ....|.|..|.:...|.:
 Worm   168 EGT---RNAE-PELLPFKKGAFILAKQAK 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 48/209 (23%)
LPLAT_LCLAT1-like 75..271 CDD:153252 36/148 (24%)
Acyltransf_C 258..336 CDD:292694
acl-1NP_510606.1 PlsC 26..>199 CDD:223282 47/204 (23%)
LPLAT_AGPAT-like 65..243 CDD:153251 35/146 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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