DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and AGPAT1

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001358366.1 Gene:AGPAT1 / 10554 HGNCID:324 Length:287 Species:Homo sapiens


Alignment Length:181 Identity:41/181 - (22%)
Similarity:68/181 - (37%) Gaps:61/181 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 LLIMNHKYEIDWLNGWMICEKLGVL-GNCKAYAKKAIRYVPIIGWGWWLAEFVFLNRNFDQD--- 164
            :::.||:..:|.|.      .:.|| |.|...||:.:.:....|...|||..:|::|....|   
Human   103 VVVSNHQSSLDLLG------MMEVLPGRCVPIAKRELLWAGSAGLACWLAGVIFIDRKRTGDAIS 161

  Fly   165 ------KTIITEQLKVVFSYPDPTWLLLNAEGTRFTPAKHEASVKFAQERG-------------- 209
                  :|::|:.::|        |:.  .||||    .|..|: ...:||              
Human   162 VMSEVAQTLLTQDVRV--------WVF--PEGTR----NHNGSM-LPFKRGAFHLAVQAQVPIVP 211

  Fly   210 --MTVLKHHLIPRTKGFTASLAPIRGLCPVIYDINLAYRPT-----DKTPA 253
              |:..:.....:.:.||:....:|.|.||         ||     |..||
Human   212 IVMSSYQDFYCKKERRFTSGQCQVRVLPPV---------PTEGLTPDDVPA 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 41/181 (23%)
LPLAT_LCLAT1-like 75..271 CDD:153252 41/181 (23%)
Acyltransf_C 258..336 CDD:292694
AGPAT1NP_001358366.1 LPLAT_AGPAT-like 73..259 CDD:153251 41/181 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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