DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and lpgat1

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_017949604.1 Gene:lpgat1 / 100494107 XenbaseID:XB-GENE-985546 Length:429 Species:Xenopus tropicalis


Alignment Length:361 Identity:76/361 - (21%)
Similarity:136/361 - (37%) Gaps:80/361 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LLMHVFIKPIDKRLFRKLMYYACYSLYSQLIFVS---DWYAGSKMTVYMDKEDFEKHA-GKEHVL 104
            :|..:.::|: :.:.|||.:|....::..|:.:.   .||||..:..:.|    ..|: .::..:
 Frog    96 VLYLIALQPV-RVIDRKLFWYIEGVMFKWLLAMVASWGWYAGYTVVEWGD----NVHSISEDEAV 155

  Fly   105 LIMNHKYEIDWLNGWMICEKLGVLGNCKAYAKKAIRYVPIIGWGWWLAEFVFLNRNF-------- 161
            :::||:...|      :|    .|..|.......:|.:      .||.:.:|...||        
 Frog   156 MLVNHQATGD------VC----TLMMCLQDKGTVVRQM------MWLMDHIFKYTNFGIVSLVHG 204

  Fly   162 -----------DQDKTIITEQLKVVFSYPDPTWLLLNAEGTRFTPAKHEASVKFAQERGMTVLKH 215
                       ||...::.:.|:..:...|..|::|..|| .|...:.|.|..:|::..:..|.|
 Frog   205 DFFIRQGKAYRDQQLVLLKDHLEKYYRSRDRKWIILFPEG-GFLRKRRETSQLYAKKNSLPHLTH 268

  Fly   216 HLIPRTKGFTASL-----------APIRGLCPV----------IYDINLAYRPTDKTPATMLSLL 259
            ..:||. |.|..:           .|..|...|          :.|..:.|............|.
 Frog   269 VTLPRL-GATQVILNTLLAQQENGTPTAGNTEVKERKQKGLQWVIDATIGYPNAHPMDIQTWILG 332

  Fly   260 HGKSVEPHLLMRRIPLEQVPEDEKEAAAWLQNLFVEKDKIIDSFLETGSFFKTSGIKEVPAYVNK 324
            :.:....|:..|..|::.||.:.:....||...||||:.::..|.|||:|....|..:..:    
 Frog   333 YRQPTVTHVYYRIYPIKDVPMETEALTDWLYQRFVEKEDLLAHFYETGAFPPLKGQSKASS---- 393

  Fly   325 RRLCSLVNFVCWAVFSLS--------CIFYYVITSL 352
             |..:|.|...:.|.||:        |:..|...||
 Frog   394 -REMALSNSWLFLVQSLAFLSGYMWYCLLQYFYRSL 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 76/361 (21%)
LPLAT_LCLAT1-like 75..271 CDD:153252 43/239 (18%)
Acyltransf_C 258..336 CDD:292694 21/77 (27%)
lpgat1XP_017949604.1 LPLAT_LCLAT1-like 128..344 CDD:153252 43/237 (18%)
Acyltransf_C 333..404 CDD:374349 20/75 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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