DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and Lpcat2

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001258273.1 Gene:Lpcat2 / 100359680 RGDID:2325051 Length:544 Species:Rattus norvegicus


Alignment Length:44 Identity:12/44 - (27%)
Similarity:23/44 - (52%) Gaps:3/44 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 VLLIMNHKYE-IDWL-NGWMICEKLGVLGNCKAYAKKAIRYVPI 144
            |||...:|.: :.|. .|:...: |.||..|:.:.|..:.::|:
  Rat   246 VLLRYPNKLDTVTWTWQGYTFIQ-LCVLTFCQLFTKVEVEFMPV 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 12/44 (27%)
LPLAT_LCLAT1-like 75..271 CDD:153252 12/44 (27%)
Acyltransf_C 258..336 CDD:292694
Lpcat2NP_001258273.1 PlsC 103..>254 CDD:223282 3/7 (43%)
LPLAT_LPCAT1-like 116..327 CDD:153253 12/44 (27%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 146..151
EGTC motif 220..223
EFh 396..458 CDD:238008
EF-hand_7 396..457 CDD:290234
EF-hand_7 433..489 CDD:290234
EFh 433..486 CDD:238008
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 520..544
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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