DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat3 and lclat1

DIOPT Version :9

Sequence 1:NP_001246793.1 Gene:Agpat3 / 39820 FlyBaseID:FBgn0036623 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001135517.1 Gene:lclat1 / 100216057 XenbaseID:XB-GENE-5993059 Length:371 Species:Xenopus tropicalis


Alignment Length:283 Identity:71/283 - (25%)
Similarity:128/283 - (45%) Gaps:23/283 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 EHVLLIMNHKYEIDWLNGWMICEKLGVLGNCKAYAKKAIRYVPIIGWGWWLAEFVFLNRNFDQDK 165
            |..::||||:..:||:..|....:...|...|...|.:::.||..||...:|.|:|::|.::.||
 Frog    77 ERSVIIMNHRTRLDWMFLWNCLLRYSYLRLEKICLKSSLKAVPGFGWAMQVAAFIFIHRKWEDDK 141

  Fly   166 TIITEQLKVVFSYPDPTWLLLNAEGTRFTPAKHEASVKFAQERGMTVLKHHLIPRTKGFTASLAP 230
            ......|.......:...||:..|||..|......|.:||::..:...::.|.|||.|||..:..
 Frog   142 NHFEAMLDYFCDIKEHLQLLIFPEGTDLTDNTKARSDEFAEKNKLQKYEYVLHPRTTGFTFIVDR 206

  Fly   231 IR--GLCPVIYDINLAYRPTDKTPATMLSLLHGK-SVEPHLLMRRIPLEQVPEDEKEAAAWLQNL 292
            :|  .....|:||.:||  ....|.|...:|:|. ..|.|..:.|.|:..:|..::|...|.|..
 Frog   207 LREGNNLDAIHDITVAY--PHNIPQTEKHILNGNFPKEIHFHVCRYPVSSLPVSKEELQLWCQQR 269

  Fly   293 FVEKDKIIDSFLETGSFFKTSGIKEVPAYVNKRR--LCSLVNFVCWAVFSLSCI----------F 345
            :.||:..:.:|.:...:|..:....:|...::.|  |..:.:.:.|.:|.|:.|          :
 Frog   270 WKEKEDRLRAFYQGERYFDATRRSRIPPCKSELRVHLIKMASLLYWTLFPLAMIVLLYLYSPVRW 334

  Fly   346 YYVITSLLAANWTAFITALSVLG 368
            |:::|.::      |:....:.|
 Frog   335 YFLVTVVI------FVLQEKIFG 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat3NP_001246793.1 PLN02380 23..387 CDD:178006 71/283 (25%)
LPLAT_LCLAT1-like 75..271 CDD:153252 50/172 (29%)
Acyltransf_C 258..336 CDD:292694 17/80 (21%)
lclat1NP_001135517.1 LPLAT_LCLAT1-like 55..247 CDD:153252 50/171 (29%)
Acyltransf_C 233..302 CDD:374349 15/68 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D959325at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3473
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.040

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