DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and Lpcat4

DIOPT Version :9

Sequence 1:NP_001261942.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_997089.1 Gene:Lpcat4 / 99010 MGIID:2138993 Length:524 Species:Mus musculus


Alignment Length:431 Identity:74/431 - (17%)
Similarity:115/431 - (26%) Gaps:203/431 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GLGRLLIAVTFFTCGFFVNIGQLLLILLVRPFDKKLSRSLAYYL----HYSFY-------CIL-- 57
            ||.|||    ||..||          |.:|...::.||..|..|    |.:|:       |.|  
Mouse    95 GLSRLL----FFLLGF----------LRIRVRGQRASRLEAPVLVAAPHSTFFDPIVLLPCDLPK 145

  Fly    58 ----------------------VCVAEWYAGSKLRVYIDPQDEQKFFGKEHGLLLMNHTYEIDWL 100
                                  :.|:.....|:.||..:.:......||              |.
Mouse   146 VVSRAENLSVPVIGALLRFNQAILVSRHDPASRRRVVEEVRRRATSGGK--------------WP 196

  Fly   101 TAWMITDKLGNLGGTKAYAKKMLRY--------VPV-------------LGWVW---------WM 135
            ......:      ||.:..|.:|::        |||             ..|.|         |:
Mouse   197 QVLFFPE------GTCSNKKALLKFKPGAFIAGVPVQPVLIRYPNSLDTTSWAWRGPGVLKVLWL 255

  Fly   136 ----------AEFIFLDRNFEKDKVVIKTQLKEVFSYPDPVWLLLNAEGTRFTPAKHELSVKFAE 190
                      .||:          .|.:..|:|   ..||.....|.:..            .|:
Mouse   256 TASQPCSIVDVEFL----------PVYQPSLEE---SKDPTLYANNVQRV------------MAQ 295

  Fly   191 ERGLPLLKHHLIPRTKGFTTSLPTM----------------------RGICPAIYDINLAFKKNA 233
            ..|:|..:..       |..|||.:                      .|:.|...|:      .|
Mouse   296 ALGIPATECE-------FVGSLPVIVVGQLKVALEPQLWELAKVLQKAGLSPGFVDM------GA 347

  Fly   234 EP-KPTMLSQLNGEPVEPYMYIRRVPLDVVPDDEKEAAAWMQDFFAEKDKIIDSFHETG------ 291
            || :..|:||        ..:.:::.|.   |.:..|.|:  .:|.:..|.:..|....      
Mouse   348 EPGRSRMISQ--------EAFAQQLQLS---DPQTVAGAF--SYFQQDAKGLVDFRNVALALAAL 399

  Fly   292 --------------SFFKNSGVKEVPEKIYKPRLSTLLNFL 318
                          ..|.....:.....:||...||:|:.|
Mouse   400 DGGRSLEELTRLAFELFAEEQAEGSDRLLYKDGFSTILHLL 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_001261942.1 PLN02380 12..366 CDD:178006 69/425 (16%)
LPLAT_LCLAT1-like 58..255 CDD:153252 41/259 (16%)
Acyltransf_C 243..320 CDD:292694 14/96 (15%)
Lpcat4NP_997089.1 LPLAT_LPCAT1-like 109..306 CDD:153253 37/248 (15%)
PlsC 109..295 CDD:223282 34/230 (15%)
HXXXXD motif 129..134 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 490..524
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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