DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and plsC

DIOPT Version :10

Sequence 1:NP_648887.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_417490.1 Gene:plsC / 947496 ECOCYCID:EG11377 Length:245 Species:Escherichia coli


Alignment Length:284 Identity:62/284 - (21%)
Similarity:88/284 - (30%) Gaps:117/284 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 YCILVCVAEWYAGSKLRVYI-----DPQDEQKF---FGK--------------------EHGLLL 90
            |.|||||    .||   :|.     :|:....|   ||:                    .:.:.:
E. coli    13 YSILVCV----FGS---IYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPTDAESYGNAIYI 70

  Fly    91 MNHTYEIDWLTAWMITDKLGNLGGTKAYAKKMLRYVPVLGWVWWMAEFIFLDRN----------- 144
            .||....|.:||..|...     .|....||.|.::|..|.::|:...:.:|||           
E. coli    71 ANHQNNYDMVTASNIVQP-----PTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRTKAHGTIAE 130

  Fly   145 ----FEKDKVVIKTQLKEVFSYPDPVWLLLNAEGTRFTPAKHELSVKFAEERGLPLLKHHLIPRT 205
                |:|.::              .:|:.  .||||              .||..||..    :|
E. coli   131 VVNHFKKRRI--------------SIWMF--PEGTR--------------SRGRGLLPF----KT 161

  Fly   206 KGFTTSLPTMRGICPAIYD-----INLAFKKNAEPKPTMLSQLNGEPVEPYMYIRRVPLDVV--- 262
            ..|..::.....|.|....     |||....|......||.                |:||.   
E. coli   162 GAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLP----------------PIDVSQYG 210

  Fly   263 PDDEKEAAAW----MQDFFAEKDK 282
            .|..:|.||.    |:...||.||
E. coli   211 KDQVRELAAHCRSIMEQKIAELDK 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_648887.1 PLN02380 12..366 CDD:178006 62/284 (22%)
plsCNP_417490.1 PRK15018 1..245 CDD:184979 62/284 (22%)

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