DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and YDR018C

DIOPT Version :9

Sequence 1:NP_001261942.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_010301.1 Gene:YDR018C / 851581 SGDID:S000002425 Length:396 Species:Saccharomyces cerevisiae


Alignment Length:383 Identity:90/383 - (23%)
Similarity:162/383 - (42%) Gaps:75/383 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LRGLGRLLIAVTFFTCGFFVNIGQLLLILLVRPFDKKLSRSLAYYLHYSFYCILVCVAEWYAGSK 68
            ::||.|||||..|.:....:.:.|:.|.:|: |:.|...::.......:|..:|..:....|.|.
Yeast    21 IKGLQRLLIACLFISGSLSIVVFQICLQVLL-PWSKIRFQNGINQSKKAFIVLLCMILNMVAPSS 84

  Fly    69 LRVYIDPQDEQK--------FFGKEHGLLLMNHTYEIDWLTAWMITDKLGNLGGTKAY--AKKML 123
            |.|..:.....|        |..|:..:::.||....||:..|.:: .:.|||| ..|  .||.|
Yeast    85 LNVTFETSRPLKNSSNAKPCFRFKDRAIIIANHQMYADWIYLWWLS-FVSNLGG-NVYIILKKAL 147

  Fly   124 RYVPVLGWVWWMAEFIFLDRNFEKDKVVIKTQL------------------------KEVFSYPD 164
            :|:|:||:.....:||||.||::||:..:...|                        :.:.:|. 
Yeast   148 QYIPLLGFGMRNFKFIFLSRNWQKDEKALTNSLVSMDLNARCKGPLTNYKSCYSKTNESIAAYN- 211

  Fly   165 PVWLLLNAEGTRFTPAKHELSVKFAEERGLP--LLKHHLIPRTKGFTTSLPTMRGICPAIYDINL 227
               |::..|||..:....|.|..|.:...|.  .|:|.|:|.:||...::..:.....||||:.:
Yeast   212 ---LIMFPEGTNLSLKTREKSEAFCQRAHLDHVQLRHLLLPHSKGLKFAVEKLAPSLDAIYDVTI 273

  Fly   228 AFKKNAEPKPTMLSQLNGE-------------PVEPYMYIRRVPLDVVP-DDEKEAAAWMQDFFA 278
            .:      .|.:.::..|.             |.:...|||...::.:| .|::....|:...:.
Yeast   274 GY------SPALRTEYVGTKFTLKKIFLMGVYPEKVDFYIREFRVNEIPLQDDEVFFNWLLGVWK 332

  Fly   279 EKDKIIDSFHETGSFFKNSGVKEVPEKIYKPRLST----------LLNFLGWATFAVL 326
            |||::::.::.||.|  .|..|...:.|.....:|          :|::.|:..|.:|
Yeast   333 EKDQLLEDYYNTGQF--KSNAKNDNQSIVVTTQTTGFQHETLTPRILSYYGFFAFLIL 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_001261942.1 PLN02380 12..366 CDD:178006 85/375 (23%)
LPLAT_LCLAT1-like 58..255 CDD:153252 56/245 (23%)
Acyltransf_C 243..320 CDD:292694 19/100 (19%)
YDR018CNP_010301.1 LPLAT_LCLAT1-like 102..308 CDD:153252 51/217 (24%)
Acyltransf_C 300..>347 CDD:406475 12/46 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345790
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 93 1.000 Inparanoid score I1515
Isobase 1 0.950 - 0 Normalized mean entropy S3011
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9217
orthoMCL 1 0.900 - - OOG6_102498
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3473
SonicParanoid 1 1.000 - - X1337
TreeFam 00.000 Not matched by this tool.
109.670

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