DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Agpat4 and GPAT3

DIOPT Version :10

Sequence 1:NP_648887.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:XP_016864269.1 Gene:GPAT3 / 84803 HGNCID:28157 Length:526 Species:Homo sapiens


Alignment Length:181 Identity:45/181 - (24%)
Similarity:74/181 - (40%) Gaps:53/181 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GLGRLLIAVTFFTCGFFVNIGQLLLILLVRPFDKKLSRSLAYYLHYSFYCILVCVAE-----WYA 65
            |:..|:|..|.        :|||       | |..|...|:..:|.:  |..:||..     .|.
Human   259 GISLLVIGTTL--------VGQL-------P-DSSLKNWLSELVHLT--CCRICVRALSGTIHYH 305

  Fly    66 GSKLRVYIDPQDEQKFFGKEHGLLLMNHTYEIDWLTAWMITD----KLGNL-GGTKAYAKK-MLR 124
            ..:.|    ||        :.|:.:.|||..||.|.  :.||    .:|.: ||.....:: |::
Human   306 NKQYR----PQ--------KGGICVANHTSPIDVLI--LTTDGCYAMVGQVHGGLMGIIQRAMVK 356

  Fly   125 YVPVLGWVWWMAEFIFLDRNFEKDKVVIKTQLKEVFSYPDPVWLLLNAEGT 175
            ..|   .||:       :|:..||:.::..:|||..:....:.:|:..|||
Human   357 ACP---HVWF-------ERSEMKDRHLVTKRLKEHIADKKKLPILIFPEGT 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_648887.1 PLN02380 12..366 CDD:178006 43/175 (25%)
GPAT3XP_016864269.1 LPLAT_LPCAT1-like 291..500 CDD:153253 32/131 (24%)

Return to query results.
Submit another query.