DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and LPAT3

DIOPT Version :9

Sequence 1:NP_001261942.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_175537.1 Gene:LPAT3 / 841549 AraportID:AT1G51260 Length:376 Species:Arabidopsis thaliana


Alignment Length:365 Identity:121/365 - (33%)
Similarity:202/365 - (55%) Gaps:18/365 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IAVTFFTCGFFVNIGQLLLILLVRPFDKKLSRSLAYYLHYSFYCILVCVAEWYAGSKLRVYIDPQ 76
            :.|.|...|..|||.||:..::||||.:.|.|.:...:....:..|:.:.:|:|..|:.:|:| .
plant    12 VGVLFLISGLIVNIIQLVFFIIVRPFSRSLYRRINKNVAELLWLQLIWLFDWWACIKINLYVD-A 75

  Fly    77 DEQKFFGKEHGLLLMNHTYEIDWLTAWMITDKLGNLGGTKAYAKKMLRYVPVLGWVWWMAEFIFL 141
            :..:..||||.|:|.||..:||||..|::..::|.||.:.|..||..:|:|::||..|.:::|||
plant    76 ETLELIGKEHALVLSNHRSDIDWLIGWVMAQRVGCLGSSLAIMKKEAKYLPIIGWSMWFSDYIFL 140

  Fly   142 DRNFEKDKVVIKTQLKEVFSYPDPVWLLLNAEGTRFTPAKHELSVKFAEERGLPLLKHHLIPRTK 206
            :|::.||:..:|...|.:..:|...||.|..||||||..|.|.:.::|..|.||..::.||||||
plant   141 ERSWAKDENTLKAGFKRLEDFPMTFWLALFVEGTRFTQEKLEAAQEYASIRSLPSPRNVLIPRTK 205

  Fly   207 GFTTSLPTMRGICPAIYDINLAFKKNAEPKPTMLSQLNGEPVEPYMYIRRVPLDVVPDDEKEAAA 271
            ||.:::..:|...|||||..|....| :|.||:|...:|:..|..:.:||..:..:|:.:...|.
plant   206 GFVSAVSEIRSFVPAIYDCTLTVHNN-QPTPTLLRMFSGQSSEINLQMRRHKMSELPETDDGIAQ 269

  Fly   272 WMQDFFAEKDKIIDSFHETGSFFKNSGVKEVPEKIYKPRLSTLLNFLGWATFAVLCILHYLVTSL 336
            |.||.|..||..::.:. |...|.:..|.::...| || |..::.:||:..|....:|.:|  |:
plant   270 WCQDLFITKDAQLEKYF-TKDVFSDLEVHQINRPI-KP-LIVVIIWLGFLVFGGFKLLQWL--SI 329

  Fly   337 VAGNW-----FGFITVLSILGGFYSLMEYAVNASKISKAS 371
            || :|     |.|..|::.:     .|:..:.:|:..:::
plant   330 VA-SWKIILLFVFFLVIATI-----TMQILIQSSESQRST 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_001261942.1 PLN02380 12..366 CDD:178006 120/358 (34%)
LPLAT_LCLAT1-like 58..255 CDD:153252 75/196 (38%)
Acyltransf_C 243..320 CDD:292694 20/76 (26%)
LPAT3NP_175537.1 PLN02380 1..376 CDD:178006 121/365 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 112 1.000 Domainoid score I2059
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10591
Inparanoid 1 1.050 223 1.000 Inparanoid score I1184
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D959325at2759
OrthoFinder 1 1.000 - - FOG0001449
OrthoInspector 1 1.000 - - mtm1207
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10983
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1337
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.930

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