DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Agpat4 and agpat5

DIOPT Version :9

Sequence 1:NP_001261942.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001070213.2 Gene:agpat5 / 767778 ZFINID:ZDB-GENE-060929-914 Length:365 Species:Danio rerio


Alignment Length:365 Identity:95/365 - (26%)
Similarity:158/365 - (43%) Gaps:52/365 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LLLILLVRPFDKK--------LSRSLAYYLHYSFYCILVCV--AEWYAGSKLRVYIDPQDEQKFF 82
            :||.|:|..:..:        |..:.||.|.:|.:.:|..:  |..|.....|.|...|....||
Zfish     1 MLLSLVVHTYSLRYWLPTAVMLGTAPAYLLSWSVWRLLSAILPARLYHTVDDRAYSVYQSMVLFF 65

  Fly    83 -----------------GKEHGLLLMNHTYEIDWLTAWMITDKLGNLGGTKAYAKKMLRYVPVLG 130
                             .||:.:.|.||....||:.|.|:..:...:|..:...|..|:::|:.|
Zfish    66 FENYTGVEIVIYGEIPKKKENVVYLSNHQSTADWIIADMLAIRQNAIGHVRYVLKDGLKWLPLYG 130

  Fly   131 WVWWMAEFIFLDRNFEKDKVVIKTQLKEVFSYPDPVWLLLNAEGTRFTPAKHEL---SVKFAEER 192
            |.:.....:::.|:...|:..:|.:|........|::|::..||||:.|...::   |..||.::
Zfish   131 WYFSQHGGVYVKRSANFDEKAMKKKLSSQTRLSTPMYLVIFPEGTRYNPELKKVISDSQAFAAKQ 195

  Fly   193 GLPLLKHHLIPRTKGFTTSLPTMRGICPAIYDINLAFK------KNAEPKPTMLSQLNGEPVEPY 251
            ||.:|.|.|.||.|....::.|||....|:|||.:|::      ....|.|||...|..|....:
Zfish   196 GLAVLNHILTPRMKASHVAIETMREHLDAVYDITVAYEGTLTADGQRRPAPTMPEFLCKECPRVH 260

  Fly   252 MYIRRVPLDVVPDDEKEAAAWMQDFFAEKDKIIDSFHET-----GSFFKNSGVKEVPEKIYKPRL 311
            ::|.||.:..:|.:......|:...|..|||::.:|:|:     .|.|...|.|. |..:.|...
Zfish   261 IHISRVDIKDIPAEPDVFRGWLHQRFEIKDKLLTTFYESEDPAKKSRFPGEGRKS-PLSLSKTLP 324

  Fly   312 STLLNFLGWATFAVLC--------ILHYLVTSLVAGNWFG 343
            |.|:  |...||.:|.        :..:|..:|:...|.|
Zfish   325 SLLI--LSGLTFPMLLTESGRKLYLNTWLYGTLIGWIWVG 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_001261942.1 PLN02380 12..366 CDD:178006 95/365 (26%)
LPLAT_LCLAT1-like 58..255 CDD:153252 58/224 (26%)
Acyltransf_C 243..320 CDD:292694 22/81 (27%)
agpat5NP_001070213.2 LPLAT_LCLAT1-like 63..263 CDD:153252 53/199 (27%)
Acyltransf_C 258..327 CDD:292694 18/69 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51956
OrthoDB 1 1.010 - - D959325at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3473
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.860

Return to query results.
Submit another query.