DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and Agpat4

DIOPT Version :9

Sequence 1:NP_001261942.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:XP_006523408.3 Gene:Agpat4 / 68262 MGIID:1915512 Length:458 Species:Mus musculus


Alignment Length:373 Identity:132/373 - (35%)
Similarity:217/373 - (58%) Gaps:21/373 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LGRLLIAVTFFTCGFFVNIGQLLLILLVRPFDKKLSRSLAYYLHYSFYCILVCVAEWYAGSKLRV 71
            |..|:....|...|..||..| |..|::.|.:|:|.|.:...|.|.....||.:.||::|::..:
Mouse    92 LCHLVFCYVFIASGLIVNAIQ-LCTLVIWPINKQLFRKINARLCYCVSSQLVMLLEWWSGTECTI 155

  Fly    72 YIDPQDEQKFFGKEHGLLLMNHTYEIDWLTAWMITDKLGNLGGTKAYAKKMLRYVPVLGWVWWMA 136
            |.||: ....:|||:.::::||.:|||:|..|.:.::||.||.:|..|||.|.|||::||:|:..
Mouse   156 YTDPK-ACPHYGKENAIVVLNHKFEIDFLCGWSLAERLGILGNSKVLAKKELAYVPIIGWMWYFV 219

  Fly   137 EFIFLDRNFEKDKVVIKTQLKEVFSYPDPVWLLLNAEGTRFTPAKHELSVKFAEERGLPLLKHHL 201
            |.||..|.:|:|:..:...|..:..||:....|::.||||||..||::|::.|:.:|||.|||||
Mouse   220 EMIFCTRKWEQDRQTVAKSLLHLRDYPEKYLFLIHCEGTRFTEKKHQISMQVAQAKGLPSLKHHL 284

  Fly   202 IPRTKGFTTSLPTMRGICPAIYDINLAFKKNAEPKPTMLSQLNGEPVEPYMYIRRVPLDVVPDDE 266
            :||||||..::..:|.:.||:||..|.|:.|  ..||:|..|||:......|:||:|::.:|:||
Mouse   285 LPRTKGFAITVKCLRDVVPAVYDCTLNFRNN--ENPTLLGVLNGKKYHADCYVRRIPMEDIPEDE 347

  Fly   267 KEAAAWMQDFFAEKDKIIDSFHETGSFFKNSGVKEVPEKIYKP--RLSTLLNFLGWATFAVLCIL 329
            .:.:||:...:.|||...:.::.||.|         ||..:.|  |..:|:|:|.||:..:....
Mouse   348 DKCSAWLHKLYQEKDAFQEEYYRTGVF---------PETPWVPPRRPWSLVNWLFWASLLLYPFF 403

  Fly   330 HYLVTSLVAGNWFGFITVLSILGGFYSL---MEYAVNASKISKASAYG 374
            .:||:.:.:|:   .:|:.|::..|...   :.:.:..::|.|.||||
Mouse   404 QFLVSMVSSGS---SVTLASLVLIFCMASMGVRWMIGVTEIDKGSAYG 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_001261942.1 PLN02380 12..366 CDD:178006 124/358 (35%)
LPLAT_LCLAT1-like 58..255 CDD:153252 81/196 (41%)
Acyltransf_C 243..320 CDD:292694 25/78 (32%)
Agpat4XP_006523408.3 PLN02380 100..406 CDD:178006 116/307 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848227
Domainoid 1 1.000 125 1.000 Domainoid score I5440
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 289 1.000 Inparanoid score I2791
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51956
OrthoDB 1 1.010 - - D482283at33208
OrthoFinder 1 1.000 - - FOG0001449
OrthoInspector 1 1.000 - - mtm8818
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10983
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3473
SonicParanoid 1 1.000 - - X1337
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.900

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