DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and Lpgat1

DIOPT Version :10

Sequence 1:NP_648887.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001102846.1 Gene:Lpgat1 / 679692 RGDID:1585897 Length:370 Species:Rattus norvegicus


Alignment Length:404 Identity:88/404 - (21%)
Similarity:148/404 - (36%) Gaps:123/404 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LIAVTFFTCGFFVNIGQLLLILLVRPFDKKLSRSLAYY--LHYSFYCILVCVAEWYAGSKLRVYI 73
            |:|:..:.|          .|::::|.....|:...|.  |.|.:...:|....||||..:   :
  Rat    30 LVAIPSYIC----------YIIILQPLRVLDSKRFWYIEGLMYKWLLGMVASWGWYAGYTV---M 81

  Fly    74 DPQDEQKFFGKEHGLLLMNHTYEIDWLTAWMITDKLGNLGGTKAYAKKMLRYVPVLGWVWWMAEF 138
            :..::.|...|:..::|:||....|..|..|.....|                ||:..:.|:.:.
  Rat    82 EWGEDIKAIAKDEAVMLVNHQATGDVCTLMMCLQDKG----------------PVVAQMMWLMDH 130

  Fly   139 IFLDRNF-------------------EKDKVVIKTQLKEVFSYPDPVWLLLNAEGTRFTPAKHEL 184
            ||...||                   ::..:|:|..|:..:...|..|::|..|| .|...:.|.
  Rat   131 IFKYTNFGIVSLIHGDFFIRQGRAYRDQQLLVLKKHLEHNYRSRDRKWIVLFPEG-GFLRKRRET 194

  Fly   185 SVKFAEERGLPLLKHHLIPRTKGFTTSLPTM--------------RGI-CPA-----IYDINLAF 229
            |..||::..||.|.|..:||.......|..:              ||: |.:     |.|..:|:
  Rat   195 SQAFAKKNNLPFLTHVTLPRFGATNIILKALVARQENGSPAGGDARGLECKSRGLQWIIDTTIAY 259

  Fly   230 KKNAEP-----------KPTMLSQLNGEPVEPYMYIRRVPLDVVPDDEKEAAAWMQDFFAEKDKI 283
            .| |||           |||:          .:::.|..|:..||.:.::...|:...|.||:.:
  Rat   260 PK-AEPIDIQTWILGYRKPTV----------THVHYRIFPIADVPLETEDLTNWLYQRFIEKEDL 313

  Fly   284 IDSFHETGSFFKNSGVKEVPEKIYKPRLSTLLNFLGWATFAVLCILHYLVTSLVAGNWFGFITVL 348
            :..|::||:|....|.||...     |..||.|.                       |...|...
  Rat   314 LSHFYKTGAFPPPQGQKEAVS-----RAMTLSNV-----------------------WILLIQSF 350

  Fly   349 SILGGF--YSLMEY 360
            :.|.|:  |.:::|
  Rat   351 AFLSGYLWYHVIQY 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_648887.1 PLN02380 12..366 CDD:178006 87/403 (22%)
Lpgat1NP_001102846.1 LPLAT_LCLAT1-like 69..285 CDD:153252 54/246 (22%)
Acyltransf_C 274..344 CDD:465006 22/107 (21%)

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