DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and lpgat1

DIOPT Version :9

Sequence 1:NP_001261942.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001025129.1 Gene:lpgat1 / 561832 ZFINID:ZDB-GENE-030131-2906 Length:371 Species:Danio rerio


Alignment Length:384 Identity:93/384 - (24%)
Similarity:148/384 - (38%) Gaps:98/384 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LIAVTFFTCGFFVNIGQLLLILLVRPFDKKLSRSLAYYLH-YSFYCILVCVAEW-----YAGSKL 69
            |:..||......|.|....|.|:|....:.|.....:|:. ..|..:|..||.|     |..::.
Zfish    19 LLRFTFMFVNNCVAIPSYCLYLIVLQPLRVLDAQTFWYIEGVMFRWLLAMVASWGWCAGYTVTEW 83

  Fly    70 RVYIDPQDEQKFFGKEHGLLLMNHTYEIDWLTAWM-ITDKLGNLGGTKAYAKKMLRYVPVLGWVW 133
            ...:.|..|      :..::::||....|..|..| :.||     ||  ..:||:          
Zfish    84 GDDVSPMTE------DEAMVIVNHQATGDVCTLMMCLQDK-----GT--VVRKMM---------- 125

  Fly   134 WMAEFIFLDRNF-------------------EKDKVVIKTQLKEVFSYPDPVWLLLNAEGTRFTP 179
            |:.:.:|...||                   ||..|.:|..|.:.:...|..|::|..|| .|..
Zfish   126 WLMDHVFKYTNFGVVSLIHGDFFIRQGKAHREKQLVYLKDHLDKFYYSRDRKWIVLFPEG-GFLR 189

  Fly   180 AKHELSVKFAEERGLPLLKHHLIPRTKGFTTSLPTMRGICPA----------------------- 221
            .:.|.|..||::..||.|.|..:||. |.|..:  ::.:.|.                       
Zfish   190 KRRETSQSFAKKNDLPYLTHVTLPRL-GATQII--LKNLGPQQENGILGTDGSPPGQSNKPKGLQ 251

  Fly   222 -IYDINLAFKKNAEPKPTMLSQLNG--EPVEPYMYIRRVPLDVVPDDEKEAAAWMQDFFAEKDKI 283
             :.|:.:|: .||.|. .:.:.:.|  :|...:::.|..|:..||.|.:....|:...|.||:|:
Zfish   252 WVIDMTIAY-PNARPM-DIQTWIFGYRDPTVTHVHYRTYPIKDVPVDSEALTDWLYQRFVEKEKL 314

  Fly   284 IDSFHETGSFFKNSGVKEVPEKIYKPRLSTLLNFLGW----ATFAV------LCILHYL 332
            :..|:|||:|....|.||:..     |..||.|  .|    .|||.      ..|||::
Zfish   315 LAHFYETGAFPPLDGQKEMVS-----REMTLDN--AWLFLVQTFAFASGYMWYSILHHI 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_001261942.1 PLN02380 12..366 CDD:178006 92/383 (24%)
LPLAT_LCLAT1-like 58..255 CDD:153252 52/247 (21%)
Acyltransf_C 243..320 CDD:292694 24/78 (31%)
lpgat1NP_001025129.1 LPLAT_LCLAT1-like 69..286 CDD:153252 52/245 (21%)
Acyltransf_C 275..>331 CDD:292694 17/55 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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