DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and lpcat2

DIOPT Version :9

Sequence 1:NP_001261942.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001018492.1 Gene:lpcat2 / 553683 ZFINID:ZDB-GENE-050522-229 Length:529 Species:Danio rerio


Alignment Length:78 Identity:20/78 - (25%)
Similarity:28/78 - (35%) Gaps:14/78 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LGRLLIAVTFFTCGFFVNIGQLLLILLVRPFDKKLSRSLAYYLHYSFYCILVCVAEWYAGSKLRV 71
            |||:.    ||..||.|.:.......|..|.       ||...|.||:..:.|:......:..|:
Zfish    96 LGRMY----FFGMGFKVVVKGKKASTLEAPI-------LAVAPHSSFFDAIACIESGLPSTVSRI 149

  Fly    72 YIDPQDEQKFFGK 84
               ...|...||:
Zfish   150 ---ESLEAPIFGR 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_001261942.1 PLN02380 12..366 CDD:178006 17/73 (23%)
LPLAT_LCLAT1-like 58..255 CDD:153252 5/27 (19%)
Acyltransf_C 243..320 CDD:292694
lpcat2NP_001018492.1 PlsC 49..297 CDD:223282 20/78 (26%)
LPLAT_LPCAT1-like 98..309 CDD:153253 18/76 (24%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 128..133 3/4 (75%)
EGTC motif 202..205
EFh 316..406 CDD:298682
EFh 378..440 CDD:238008
EF-hand_7 378..435 CDD:290234
EF-hand_7 415..473 CDD:290234
EFh 418..473 CDD:238008
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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