DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and agpat4

DIOPT Version :9

Sequence 1:NP_001261942.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001011265.1 Gene:agpat4 / 496716 XenbaseID:XB-GENE-5810939 Length:377 Species:Xenopus tropicalis


Alignment Length:369 Identity:136/369 - (36%)
Similarity:219/369 - (59%) Gaps:13/369 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LGRLLIAVTFFTCGFFVNIGQLLLILLVRPFDKKLSRSLAYYLHYSFYCILVCVAEWYAGSKLRV 71
            |..|.|:..|...|..||..| |..|:|.||:|:|.|.:...|.|.....||.:.||::.:...:
 Frog    12 LCHLFISYVFIGTGLIVNFIQ-LCTLIVWPFNKQLYRKINCRLAYCISSQLVMLLEWWSNTDCTL 75

  Fly    72 YIDPQDEQKFFGKEHGLLLMNHTYEIDWLTAWMITDKLGNLGGTKAYAKKMLRYVPVLGWVWWMA 136
            |.||::..| :|||:.::::||.:|||:|..|...::.|.||.:|..|||.|.||||:||:|:..
 Frog    76 YTDPENYTK-YGKENAIVVLNHNFEIDFLCGWNFCERFGVLGSSKVLAKKELSYVPVIGWMWYFL 139

  Fly   137 EFIFLDRNFEKDKVVIKTQLKEVFSYPDPVWLLLNAEGTRFTPAKHELSVKFAEERGLPLLKHHL 201
            |.:|..|.:|:|:..:...|..:..||:..|.|::.||||||..|||:|::.||.:|||.|||||
 Frog   140 EIVFCKRKWEEDRKTVIQGLHNLRDYPEHFWFLIHCEGTRFTEKKHEISMQVAEAKGLPKLKHHL 204

  Fly   202 IPRTKGFTTSLPTMRGICPAIYDINLAFKKNAEPKPTMLSQLNGEPVEPYMYIRRVPLDVVPDDE 266
            :||||||..::.::|.:..|:||..|.|:.|  ..||:|..|||:.....:.:||:||:.:|:||
 Frog   205 LPRTKGFAVTVQSLRNVVSAVYDSTLNFRNN--ENPTLLGVLNGKKYHADLCVRRIPLEEIPEDE 267

  Fly   267 KEAAAWMQDFFAEKDKIIDSFHETGSFFKNSGVKEVPEKIYKPRLSTLLNFLGWATFAVLCILHY 331
            :|.|:|:...:.|||...:.:::||::   .|...||.:    |..||:|::.||:.....:...
 Frog   268 QECASWLHKLYQEKDAFQEEYYKTGAY---PGTAVVPPR----RPWTLINWIFWASLLSYPLFKV 325

  Fly   332 LVTSLVAGNWFGFITVLSILGGFYSL-MEYAVNASKISKASAYG 374
            |...:.:|::| .|:|.::|....|: ....:..::|.:.||||
 Frog   326 LANMISSGSYF-TISVFALLMVIVSVGARRMIRVTEIDRGSAYG 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_001261942.1 PLN02380 12..366 CDD:178006 129/354 (36%)
LPLAT_LCLAT1-like 58..255 CDD:153252 81/196 (41%)
Acyltransf_C 243..320 CDD:292694 25/76 (33%)
agpat4NP_001011265.1 PLN02380 20..377 CDD:178006 133/361 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 129 1.000 Domainoid score I5185
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 288 1.000 Inparanoid score I2761
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D482283at33208
OrthoFinder 1 1.000 - - FOG0001449
OrthoInspector 1 1.000 - - mtm9482
Panther 1 1.100 - - O PTHR10983
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3473
SonicParanoid 1 1.000 - - X1337
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

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