DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and Lpcat1

DIOPT Version :9

Sequence 1:NP_001261942.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001094205.1 Gene:Lpcat1 / 361467 RGDID:1311599 Length:534 Species:Rattus norvegicus


Alignment Length:181 Identity:38/181 - (20%)
Similarity:65/181 - (35%) Gaps:41/181 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RLLIAVTFFTCGFFVNIGQLLLILLVRPF---------DKKLSRSLAYYLH-YSFYCILVCVAEW 63
            |||.|.              .::||..||         ||:..:.||.:.. ..|....:....|
  Rat    57 RLLFAA--------------FMMLLAWPFALVASLGPPDKEPEQPLALWRKVVDFLLKAIMRTMW 107

  Fly    64 YAGSKLRVYIDPQDEQKFFGKEHGLLLMNHTYEIDWLTAWMITDKLGNLGGTKAYAKKMLRYVPV 128
            :||...||.:  :..|....:...|.|..|:...|.:...|....:        ..|...|.:|:
  Rat   108 FAGGFHRVAV--KGRQALPTEAAILTLAPHSSYFDAIPVTMTMSSI--------VMKAESRDIPI 162

  Fly   129 LGWVWWMAEFIFLDRNFE--KDKVV--IKTQLKEVFSYPDPVWLLLNAEGT 175
            .|.:......:|:.|:.:  :.|.|  ||.:.:....:|.   :::..|||
  Rat   163 WGTLIRYIRPVFVSRSDQDSRRKTVEEIKRRAQSNGKWPQ---IMIFPEGT 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_001261942.1 PLN02380 12..366 CDD:178006 35/178 (20%)
LPLAT_LCLAT1-like 58..255 CDD:153252 25/122 (20%)
Acyltransf_C 243..320 CDD:292694
Lpcat1NP_001094205.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
PlsC 59..>242 CDD:223282 36/179 (20%)
LPLAT_LPCAT1-like 103..314 CDD:153253 25/121 (21%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 135..140 1/4 (25%)
EFh <350..412 CDD:298682
EFh 384..446 CDD:298682
EF-hand_7 421..479 CDD:290234
EF-hand_8 432..483 CDD:290545
Di-lysine motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 531..534
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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