DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and aup1

DIOPT Version :10

Sequence 1:NP_648887.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:XP_005173140.1 Gene:aup1 / 324654 ZFINID:ZDB-GENE-030131-3375 Length:429 Species:Danio rerio


Alignment Length:289 Identity:62/289 - (21%)
Similarity:106/289 - (36%) Gaps:66/289 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLIAVTFFTCGFFVNIGQLLLILLVRPFDKKLSRSLAYYLHYSFYCILVCVAEWYAGSKLRVYID 74
            ||:.:.:...||.:    :||.:.:......:|.:|...:...|...::|       |.|.:::.
Zfish    22 LLLLLLYAPVGFCL----MLLRIFIGVHVFLVSCALPDSIVRRFIVRIMC-------SVLGLHVQ 75

  Fly    75 PQDEQKFFGKEHGLLLMNHTYEIDWLTAWMITDKLGNLGGTKAYAKKMLRYVPVLGWVWWMAEFI 139
             |:..:...|...|.:.||....|.....::|.           ....|...|| |::.|...|:
Zfish    76 -QNSPRLRDKTTRLYVCNHVTHFDHNIINLLTS-----------CNTPLLEGPV-GFLCWARGFM 127

  Fly   140 FLDRNFEKDKVVIKTQLKEVF----SYPDPVWLLLNAEGTRFTPAKHELSVKFAEE---RG-LPL 196
            .|.:.     |..:|:|.|..    |.||.:.|||                 |.||   .| ..|
Zfish   128 ELGQG-----VGSRTELTETLHRYCSSPDTLPLLL-----------------FPEEDTTNGRTGL 170

  Fly   197 LKHHLIPRTKGFTTSLPTMRGICPAIYDINLAFKKNAEPKPTMLSQLNGEPVEPY--MYIRRVPL 259
            ||....|    |:.|    ..|.|....:...|...:.|:.:.|::|......|:  .::|.:|.
Zfish   171 LKFSSWP----FSVS----DSIQPVALLVKRPFIAVSTPESSWLTELLWTFFVPFTVYHVRWLPP 227

  Fly   260 DVVPDDE--KEAAAWMQDFFAEKDKIIDS 286
            ....|.|  :|.|:.:|...|.:..:|.:
Zfish   228 LSKEDGETHQEFASKVQGLLATELGVIST 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_648887.1 PLN02380 12..366 CDD:178006 60/287 (21%)
aup1XP_005173140.1 LPLAT 63..263 CDD:473073 53/244 (22%)
CUE_AUP1 310..354 CDD:270603
Blue background indicates that the domain is not in the aligned region.

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