DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and Tmem68

DIOPT Version :10

Sequence 1:NP_648887.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001101373.1 Gene:Tmem68 / 312946 RGDID:1309006 Length:329 Species:Rattus norvegicus


Alignment Length:288 Identity:52/288 - (18%)
Similarity:92/288 - (31%) Gaps:99/288 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GRLLIAVTFFTCGFFVNIGQLLLILLVRPFDKKLSRSLAYYLHYSFYCIL-----VCVAEWYAGS 67
            |.:.|...:|....|::.|:...::.    |..:.:...:.|....:|.|     .||....:|.
  Rat   130 GAIPIDFYYFMAKIFIHKGRTCRVVA----DHFVFKIPGFSLLLDVFCALHGPREKCVEILRSGH 190

  Fly    68 KLRVYIDPQDEQKFFGKEHGLLLMNHTYEIDWLTAWMITDKLGNLGGTKAYAKKML-RYVPVLGW 131
            .|.  |.|       |.....||.:.||.|.|             |..|.:|:..: ..||::  
  Rat   191 LLA--ISP-------GGVREALLSDETYNIIW-------------GNRKGFAQVAIDAKVPII-- 231

  Fly   132 VWWMAEFIFLDRNFEKDKVVIKTQLKEVFSYPDPVWLLLNAEGTRFTPAKHELSVKFAEERGLPL 196
                              .:....::|.|.         :..|||.....:|   ||        
  Rat   232 ------------------PMFTQNIREGFR---------SLGGTRLFKWLYE---KF-------- 258

  Fly   197 LKHHLIPRTKGFTTSLPTMRGICPAIYDINLAFKKNAEPKPTMLSQLNGEPVEPYMYIRRVPLDV 261
             ::...|...||...|.|..| .|..||..:..::.||.....:..|    ::.:   :|:|.::
  Rat   259 -RYPFAPMYGGFPVKLRTFLG-DPIPYDPEVTAEELAEKTKNAVQAL----IDKH---QRIPGNI 314

  Fly   262 VPDDEKEAAAWMQDFFAEKDKIIDSFHE 289
                              :..::|.||:
  Rat   315 ------------------RSALLDRFHK 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_648887.1 PLN02380 12..366 CDD:178006 51/284 (18%)
Tmem68NP_001101373.1 LPLAT_MGAT-like 103..309 CDD:153249 47/253 (19%)

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