DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and Agpat2

DIOPT Version :10

Sequence 1:NP_648887.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001101291.1 Gene:Agpat2 / 311821 RGDID:1309229 Length:278 Species:Rattus norvegicus


Alignment Length:316 Identity:66/316 - (20%)
Similarity:119/316 - (37%) Gaps:100/316 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LLLILLVRPFDKKLSRSLAYYLHYSFYCIL----------VC-------------VAEWYAGSKL 69
            |||:|||     :|:|:..:|:....||:|          ||             :..|:..|..
  Rat    12 LLLLLLV-----QLNRTARFYVKVGLYCVLCLSFSAAASIVCLLRHGGRTVDNMSIISWFVRSFK 71

  Fly    70 RVY---IDPQDEQKFFGKEHGLLLMNHTYEIDWLTAWMITDKLGNLGGTKAYAKKMLRYVPVLGW 131
            .||   .:...::|.......:::.||...:|.:....|..|     .....||:.|.:...:|.
  Rat    72 YVYGLRFEVSGQKKLEVDGPCVIISNHQSILDMMGLMEILPK-----RCVQIAKRELMFTGPVGL 131

  Fly   132 VWWMAEFIFLDRNFEK---------DKVVIKTQLKEVFSYPDPVWLLLNAEGTRFTPAKHELSVK 187
            :.::....|::|...|         ..:::|..|| |:.||         ||||           
  Rat   132 IMYLGGVYFINRQQAKTAMSLMADLGDLMVKENLK-VWIYP---------EGTR----------- 175

  Fly   188 FAEERGLPLLKHHLIPRTKG-FTTSLPTMRGICPAIYDINLAFKKNAEPKPTMLSQLNGEPVEPY 251
              .:.|      .|:|..|| |..::.....|.|.:|.   :|......|..:.:  :|.     
  Rat   176 --NDNG------DLLPFKKGAFYLAIQAQVPIIPVVYS---SFSSFYNVKTKLFT--SGT----- 222

  Fly   252 MYIRRVPLDVVPDDEKEAAAWMQDFFAEKDKIIDSFHET--GSFFKNSGVKEVPEK 305
              ||...||.||.:      .:.|  |:..|::|:.:::  .:|.:   :.|:|::
  Rat   223 --IRVQVLDAVPTN------GLTD--ADVTKLVDTCYQSMRATFLQ---ISEIPQE 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_648887.1 PLN02380 12..366 CDD:178006 66/316 (21%)
Agpat2NP_001101291.1 PlsC 62..261 CDD:439974 50/255 (20%)

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