DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and Gpat3

DIOPT Version :10

Sequence 1:NP_648887.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001020841.1 Gene:Gpat3 / 305166 RGDID:1565703 Length:457 Species:Rattus norvegicus


Alignment Length:181 Identity:45/181 - (24%)
Similarity:74/181 - (40%) Gaps:53/181 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GLGRLLIAVTFFTCGFFVNIGQLLLILLVRPFDKKLSRSLAYYLHYSFYCILVCVAE-----WYA 65
            |:..|:|..|.        :|||       | |..|...|:..:|.:  |..:||..     .|.
  Rat   167 GISLLIIGTTL--------VGQL-------P-DSSLKNWLSELVHLT--CCRICVRSLSGTIHYH 213

  Fly    66 GSKLRVYIDPQDEQKFFGKEHGLLLMNHTYEIDWLTAWMITD----KLGNL-GGTKAYAKK-MLR 124
            ..:.|    ||        :.|:.:.|||..||.|.  :.||    .:|.: ||.....:: |::
  Rat   214 NKQYR----PQ--------KGGICVANHTSPIDVLI--LATDGCYAMVGQVHGGLMGIIQRAMVK 264

  Fly   125 YVPVLGWVWWMAEFIFLDRNFEKDKVVIKTQLKEVFSYPDPVWLLLNAEGT 175
            ..|   .||:       :|:..||:.::..:|||..:....:.:|:..|||
  Rat   265 ACP---HVWF-------ERSEIKDRHLVTKRLKEHIADKKKLPILIFPEGT 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_648887.1 PLN02380 12..366 CDD:178006 43/175 (25%)
Gpat3NP_001020841.1 LPLAT_LPCAT1-like 199..408 CDD:153253 32/131 (24%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q9D517 229..234 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 429..457
Blue background indicates that the domain is not in the aligned region.

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