DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and bus-18

DIOPT Version :9

Sequence 1:NP_001261942.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_505971.2 Gene:bus-18 / 186277 WormBaseID:WBGene00044631 Length:391 Species:Caenorhabditis elegans


Alignment Length:392 Identity:102/392 - (26%)
Similarity:169/392 - (43%) Gaps:75/392 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RLLIAVTFFTCGFFVNI-GQLLLILLV--------RPFDKKLSRSLAYYLHYSFYCILVCVAEWY 64
            |.|:...|..|..|..: |..::.|.:        :.:...:.|:::|::     .|.:.:.|:.
 Worm     8 RPLLGWFFGLCILFSALFGNYIITLFLGLPILGRHKQWRNLMDRAISYWM-----TIPMGLLEFL 67

  Fly    65 AGSKLRVYIDPQDEQKFFGKEHGLLLMNHTYEIDW---------LTAWMITDKLGNLGGTKAYAK 120
            .|.::||..|..:    ||.. .:::|||...:||         :..|:||       ..|...|
 Worm    68 MGVRIRVSGDEIE----FGSP-AMIVMNHRTRLDWMYMWCALYQINPWLIT-------SNKISLK 120

  Fly   121 KMLRYVPVLGWVWWMAEFIFLDRNFEKDKVVIKTQLKEVFSYPDPVWLLLNAEGT---RFTPAKH 182
            ..|:.:|..|:....|:|:||:||.|.||......:....:......:||..|||   .:|..| 
 Worm   121 AQLKKLPGAGFGMAAAQFVFLERNAEVDKRSFDDAIDYFKNIDKKYQILLFPEGTDKSEWTTLK- 184

  Fly   183 ELSVKFAEERGLPLLKHHLIPRTKGFTTSLPTMR--GICPAIYDINLAFKKNAEPKPTMLSQLNG 245
              |.:||::.||..|.:.|.|||.||...|..||  .....||||.:|:..|.......|.....
 Worm   185 --SREFAKKNGLRHLDYVLYPRTTGFLHLLNKMREQEYVEYIYDITIAYPYNIVQSEIDLVLKGA 247

  Fly   246 EPVEPYMYIRRVPLDVVPDDEKEAAAWMQDFFAEKDKIIDSFH------------ETGSFFKNSG 298
            .|.|.:.:||::|:..||.:|::|:.|:.|.:..|::::..|:            |.|     .|
 Worm   248 SPREVHFHIRKIPISQVPLNEQDASRWLTDRWTIKEQLLHDFYSEEQPINRQFPVERG-----DG 307

  Fly   299 V----KEVPEKIYKPRLSTLLNFLGWATFAVLCILH-YLVTSLVAGNWFGFITVLSILGGFYSLM 358
            |    || |.:.:..:|::|   :.|......|..| :.|.:|..|  |.:..|:|    ||...
 Worm   308 VWRSWKE-PRRHFYVKLTSL---MFWTLVISFCSYHIFFVRTLQLG--FLYFFVIS----FYLSW 362

  Fly   359 EY 360
            .|
 Worm   363 RY 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_001261942.1 PLN02380 12..366 CDD:178006 100/389 (26%)
LPLAT_LCLAT1-like 58..255 CDD:153252 60/210 (29%)
Acyltransf_C 243..320 CDD:292694 22/92 (24%)
bus-18NP_505971.2 LPLAT_LCLAT1-like 63..257 CDD:153252 60/208 (29%)
Acyltransf_C 249..329 CDD:374349 22/88 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I6285
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 109 1.000 Inparanoid score I3462
Isobase 1 0.950 - 0 Normalized mean entropy S3011
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D959325at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4847
orthoMCL 1 0.900 - - OOG6_102498
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3473
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.750

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