DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat4 and acl-14

DIOPT Version :9

Sequence 1:NP_001261942.1 Gene:Agpat4 / 39819 FlyBaseID:FBgn0036622 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001371003.1 Gene:acl-14 / 179313 WormBaseID:WBGene00019465 Length:417 Species:Caenorhabditis elegans


Alignment Length:411 Identity:83/411 - (20%)
Similarity:146/411 - (35%) Gaps:115/411 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RLLIAVTFFTCGFFVNIGQLLLILLVRP--------FDKKLSRSLAYYLHYSFYCILVCVAEWYA 65
            |.|:.::..|..|....|.:|.::..|.        .:.||.|.|..::.|..|.         |
 Worm    45 RTLMCLSLVTIFFATYFGFMLPVMWARTVWPRLYWFVEGKLYRWLQSFIAYWGYT---------A 100

  Fly    66 GSKLRVYIDPQDEQKFFGKEHGLLLMNHTYEIDWLTAWMITDKLGNLGGTKAYAKKMLRYVPVLG 130
            |..:..|.|  |...::..|..|::.||....|..|...:....|      ..::|.|       
 Worm   101 GYDVYEYGD--DVTTYYRDERVLMMCNHQSTADVPTLMTVLQNKG------VASRKTL------- 150

  Fly   131 WVWWMAEFIFLDRNF-------------------EKDKVVIKTQLKEVFSYPDPVWLLLNAEGTR 176
               |:.:.:|....|                   :|:.:.:|..|.:||...|..|::|..|| .
 Worm   151 ---WLMDVMFRWTPFGIIGNNHGDYFIQQGKATRDKELIRLKKHLHDVFWDRDRRWVILFPEG-G 211

  Fly   177 FTPAKHELSVKFAEERGLPLLKHHLIPRTKGFTTSLPTMRGICPAIYDINLAFKKNAEPKPTMLS 241
            |...:.|.|..:.::.|.|    ||:      .|:||.|..:...:.::....:.:.||:....|
 Worm   212 FYYKRVESSQSYGKKNGFP----HLL------YTTLPRMGAVQAILEEVGPRTEDSDEPRERSNS 266

  Fly   242 QL-----------------NGEPVEPYM------YIRRVPLDV---------------------- 261
            :|                 :..|...|:      |...:||.:                      
 Worm   267 KLKLLQDTVGAIREKKYVKDTRPPIKYVLDVTIAYPNGIPLSLATFGLGTREKCDIAVNYKIYDA 331

  Fly   262 --VP-DDEKEAAAWMQDFFAEKDKIIDSFHETGSFFKNSGVKEVPEKIYKPRLSTLLNFLGWATF 323
              || :||::...||.:.:.|||:::..::.||.|  |.|.|.........::..:..|...:.:
 Worm   332 AEVPFEDEEKLRDWMYEVYKEKDEMLARYYSTGEF--NPGEKGTRIAFSWAKIIGMYGFWFGSFY 394

  Fly   324 AVLCILHYLVTSLVAGNWFGF 344
            |...:..||:||:.....|.|
 Worm   395 AQYNVYSYLITSIAKFLLFPF 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat4NP_001261942.1 PLN02380 12..366 CDD:178006 81/408 (20%)
LPLAT_LCLAT1-like 58..255 CDD:153252 45/238 (19%)
Acyltransf_C 243..320 CDD:292694 22/124 (18%)
acl-14NP_001371003.1 LPLAT_LCLAT1-like 91..324 CDD:153252 49/270 (18%)
Acyltransf_C 317..389 CDD:406475 15/73 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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