DRSC/TRiP Functional Genomics Resources

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Protein Alignment roq and RNF224

DIOPT Version :10

Sequence 1:NP_648886.1 Gene:roq / 39818 FlyBaseID:FBgn0036621 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001177157.1 Gene:RNF224 / 643596 HGNCID:41912 Length:156 Species:Homo sapiens


Alignment Length:134 Identity:32/134 - (23%)
Similarity:44/134 - (32%) Gaps:41/134 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NCPICCNEFAASQRCPVSLGCGHTICKLCLTTL-----YNRQCPFDQT----------VIVSDID 62
            :|.|||:.:..|...|..|.||||.|:.|:..|     ..|..|..|.          |.:.|:|
Human    23 DCIICCSAYDLSGHLPRRLYCGHTFCQACVRRLDTPAPEQRWIPCPQCRQSTPTPRGGVAMLDLD 87

  Fly    63 NLPINHALLQLVKDSELLELAPPP---------------------PSVQKLEPEHLKCYQLGQRC 106
            ..    |.|.:..:.|...|.|.|                     |.....:|.:. |:..|..|
Human    88 LA----AFLAVKAEREPARLEPLPLTSLKGSAITRQPAGLCPALGPQPHFPQPRYC-CWGCGSLC 147

  Fly   107 IEEL 110
            ...|
Human   148 CPPL 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
roqNP_648886.1 rad18 2..>95 CDD:273165 27/117 (23%)
mRING-HC-C3HC3D_Roquin 11..54 CDD:438300 16/45 (36%)
ROQ_II 269..324 CDD:436456
zf-CCCH 418..444 CDD:459885
RNF224NP_001177157.1 RING_Ubox 22..80 CDD:473075 17/56 (30%)
Blue background indicates that the domain is not in the aligned region.

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