| Sequence 1: | NP_001261940.1 | Gene: | roq / 39818 | FlyBaseID: | FBgn0036621 | Length: | 819 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001020123.1 | Gene: | Rc3h1 / 381305 | MGIID: | 2685397 | Length: | 1130 | Species: | Mus musculus |
| Alignment Length: | 670 | Identity: | 356/670 - (53%) |
|---|---|---|---|
| Similarity: | 425/670 - (63%) | Gaps: | 72/670 - (10%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MPIQAPSWTDFLNCPICCNEFAASQRCPVSLGCGHTICKLCLTTLYNRQCPFDQTVIVSDIDNLP 65
Fly 66 INHALLQLVKDSELLELAPPPPSVQKLEPEHLKCYQLGQRCIEELALHLKSFLNLNGNG------ 124
Fly 125 NLLTRPMLRKLVTLVNCQLMEEEGRVRALRAARSLGERTVTELILQHQNPQQLSSNLWAAVRTRG 189
Fly 190 CQFLGPAMQEEVLKLVLLALEEGSALSRKVLVMFVVQRLEPKFPQASKTSIGHVVQLLYRASCFK 254
Fly 255 VSKREADSSLMQLKEEFRTYDALRREHDAQIVQIATEAGLRIAPEQWSSLLYGDVMHKSHMQSII 319
Fly 320 DKLQTPSSFAQSVQELVIALQRTSDPAKLSSLHHHLKYLANIDPCAEVAP--WSVLAEALDAVRH 382
Fly 383 SVVGLVNFLQHHGVRKAQDGISGGGSGGTTNSNP----KYKISLCRDLNVRRVCPRGSSCTFAHS 443
Fly 444 QEEVERYRARNRGKHMKTPLALQGPPAVGVGAIKKP-LGEQEGPPLGN-MPPMLPMSPMHYMGS- 505
Fly 506 -----PRGYLDPSLGLSPGGGLPPSHHSPITRLIVPSRYDSRFSGFGGGTPRI--PSPREYQANP 563
Fly 564 V--------APTQRNANPPNFSVNSNLHKGYMLPASGGDVFH-----LANPWEQAYLAQQQH--- 612
Fly 613 PPQHPQQQQPPSSKPNPSRP 632 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| roq | NP_001261940.1 | zf-RING_5 | 13..55 | CDD:291308 | 23/41 (56%) |
| zf-CCCH | 418..444 | CDD:279036 | 16/25 (64%) | ||
| Rc3h1 | NP_001020123.1 | RING | 14..52 | CDD:214546 | 20/37 (54%) |
| HEPN-N. /evidence=ECO:0000269|PubMed:25697406 | 128..176 | 40/47 (85%) | |||
| ROQ. /evidence=ECO:0000269|PubMed:25026077 | 177..326 | 134/148 (91%) | |||
| HEPN-C. /evidence=ECO:0000269|PubMed:25697406 | 327..399 | 41/71 (58%) | |||
| zf-CCCH | 414..440 | CDD:279036 | 16/25 (64%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 493..567 | 22/91 (24%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 722..750 | ||||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1100..1130 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167846934 | |
| Domainoid | 1 | 1.000 | 304 | 1.000 | Domainoid score | I1375 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG3161 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 611 | 1.000 | Inparanoid score | I915 |
| Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S5168 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 1 | 1.000 | - | - | FOG0004107 | |
| OrthoInspector | 1 | 1.000 | - | - | otm42953 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_105901 | |
| Panther | 1 | 1.100 | - | - | O | PTHR13139 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3350 |
| SonicParanoid | 1 | 1.000 | - | - | X2848 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 15 | 14.730 | |||||