Sequence 1: | NP_001261940.1 | Gene: | roq / 39818 | FlyBaseID: | FBgn0036621 | Length: | 819 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_899027.1 | Gene: | Rnf182 / 328234 | MGIID: | 3045355 | Length: | 247 | Species: | Mus musculus |
Alignment Length: | 218 | Identity: | 50/218 - (22%) |
---|---|---|---|
Similarity: | 77/218 - (35%) | Gaps: | 79/218 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 PIQAPS---WTDFLNCPICCNEFAASQRCPVSLGCGHTICKLCLTTLYN--------RQCPF--D 53
Fly 54 QTVIVSD-IDNLPINHALLQLVKDSELLELAPPPPSVQKLEPEHLKCYQLGQRCIEELALHLKSF 117
Fly 118 LNLNGNGNLLTRPMLRKLV----TLVNCQLMEEEGRVRALRAARSLGERTVTELILQHQNPQQLS 178
Fly 179 SNLWAAVRTRGCQFLGPAMQEEV 201 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
roq | NP_001261940.1 | zf-RING_5 | 13..55 | CDD:291308 | 16/51 (31%) |
zf-CCCH | 418..444 | CDD:279036 | |||
Rnf182 | NP_899027.1 | RING-HC_RNF182 | 19..69 | CDD:319469 | 16/49 (33%) |
RING-HC finger (C3HC4-type) | 20..67 | CDD:319469 | 15/46 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167846937 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |