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Protein Alignment roq and zgc:165481
DIOPT Version :9
Sequence 1: | NP_001261940.1 |
Gene: | roq / 39818 |
FlyBaseID: | FBgn0036621 |
Length: | 819 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001092234.1 |
Gene: | zgc:165481 / 100073327 |
ZFINID: | ZDB-GENE-070615-21 |
Length: | 255 |
Species: | Danio rerio |
Alignment Length: | 105 |
Identity: | 27/105 - (25%) |
Similarity: | 40/105 - (38%) |
Gaps: | 18/105 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 DFLNCPICCNEFAASQRCPVSLGCGHTICKLCLTTLYNR-------QCPF---DQTVIVSDIDNL 64
|.|.|.||...|....|.|..|.|.|.:|..||..:.:. .||| :..|...::..|
Zfish 29 DELECKICYQRFNTHSRKPKILDCLHRVCARCLNKILDMGDGSSSISCPFCRHETQVSEFEVAGL 93
Fly 65 PINHALLQ--LVKD-----SELLELAPPPPSVQKLE-PEH 96
|.:..::. .|:| ....|:...|.|:...: |.|
Zfish 94 PDDSNIMSRLAVRDKSWSSDHSKEVVLTPKSLSSNDSPSH 133
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
roq | NP_001261940.1 |
zf-RING_5 |
13..55 |
CDD:291308 |
15/51 (29%) |
zf-CCCH |
418..444 |
CDD:279036 |
|
zgc:165481 | NP_001092234.1 |
RING |
33..79 |
CDD:214546 |
14/45 (31%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170592150 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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