DRSC/TRiP Functional Genomics Resources

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Protein Alignment roq and zgc:165481

DIOPT Version :9

Sequence 1:NP_001261940.1 Gene:roq / 39818 FlyBaseID:FBgn0036621 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001092234.1 Gene:zgc:165481 / 100073327 ZFINID:ZDB-GENE-070615-21 Length:255 Species:Danio rerio


Alignment Length:105 Identity:27/105 - (25%)
Similarity:40/105 - (38%) Gaps:18/105 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DFLNCPICCNEFAASQRCPVSLGCGHTICKLCLTTLYNR-------QCPF---DQTVIVSDIDNL 64
            |.|.|.||...|....|.|..|.|.|.:|..||..:.:.       .|||   :..|...::..|
Zfish    29 DELECKICYQRFNTHSRKPKILDCLHRVCARCLNKILDMGDGSSSISCPFCRHETQVSEFEVAGL 93

  Fly    65 PINHALLQ--LVKD-----SELLELAPPPPSVQKLE-PEH 96
            |.:..::.  .|:|     ....|:...|.|:...: |.|
Zfish    94 PDDSNIMSRLAVRDKSWSSDHSKEVVLTPKSLSSNDSPSH 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
roqNP_001261940.1 zf-RING_5 13..55 CDD:291308 15/51 (29%)
zf-CCCH 418..444 CDD:279036
zgc:165481NP_001092234.1 RING 33..79 CDD:214546 14/45 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592150
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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