DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4842 and ABA2

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_175644.1 Gene:ABA2 / 841665 AraportID:AT1G52340 Length:285 Species:Arabidopsis thaliana


Alignment Length:266 Identity:48/266 - (18%)
Similarity:88/266 - (33%) Gaps:97/266 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SLWQKRTYDRLKLHL------PKKFCQLPKMPFPDHYPEYPTKRQFIDYLESYANRFDIKPEFNK 117
            ||.::|..:..||..      ||.:   .|:.||:.|    |:.:|. .::||:     :.:.:|
plant   223 SLKEQRVTETEKLSEDVSLLDPKDY---NKIDFPETY----TEAKFY-VIKSYS-----EDDIHK 274

  Fly   118 SVESARFDETSGLWRVRTTSDGEEMEYICRWLVVATGENAERVVPEINGLMTEFDGEVIHACEYK 182
            |::.:       :|  .:|.:|.                 :::....|....:.||     |.. 
plant   275 SIKYS-------VW--SSTPNGN-----------------KKLDASYNEAKQKSDG-----CPV- 307

  Fly   183 SGEKFRGKRVLVVGCGNSGMEVSLDLANHNAITSMVVRSSVHVLPREIMGKSTFGISVMMMKWLP 247
                     .|:.....||..|.|                     .|::|...|.      |.:.
plant   308 ---------FLLFSVNTSGQFVGL---------------------AEMVGPVDFN------KTVE 336

  Fly   248 LWLVDKLL--LILSWLVLGSLSNYGLKRPDIGPMELKSMTGKTPVLDIGALEKIKSGDVEIVPAI 310
            .|..||.:  ..:.|..:..:.|..|:...:...|.|.:|......::    |::.|    :..|
plant   337 YWQQDKWIGCFPVKWHFVKDIPNSSLRHITLENNENKPVTNSRDTQEV----KLEQG----IKVI 393

  Fly   311 KQFSRH 316
            |.|..|
plant   394 KIFKDH 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 33/193 (17%)
ABA2NP_175644.1 PLN02253 3..285 CDD:177895 18/83 (22%)

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