DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4842 and NQR

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001185182.1 Gene:NQR / 841391 AraportID:AT1G49670 Length:652 Species:Arabidopsis thaliana


Alignment Length:218 Identity:60/218 - (27%)
Similarity:101/218 - (46%) Gaps:34/218 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GKNVVYLGGFGGIGQKCVQELLQRPIKALAIFDLNANE---------QLLAKWKSQHPDTDVFYH 60
            |.:.:..||..|||:.....|.::.: .:.:.|.:..:         :..||:..........:.
plant     6 GLSALVTGGASGIGRALCLALAEKGV-FVTVADFSEEKGQETTSLVREANAKFHQGLSFPSAIFV 69

  Fly    61 KLDITQKSDIDAAYKATAERFGHFDVVVNGSGLM-----------NDRLVELTIQINLLGVINST 114
            |.|:|.:.|:.||:......||..|:.:|.:|:.           ..:..:.||.::|:.|:..|
plant    70 KCDVTNRGDLLAAFDKHLATFGTLDICINNAGISTPLRFDKDDTDGSKSWKHTINVDLIAVVEGT 134

  Fly   115 LTALEYMDKAKGGKGGLIVNISSVAGLQPTAIMAIYSAAKTGVTTFTRAMANPYFYAHSGVGFLT 179
            ..|::.| ||| .|.|:|:|:.|.|||.|..:..||:|:|.||..|||::|   :|...|:....
plant   135 QLAIKAM-KAK-QKPGVIINMGSAAGLYPMPVDPIYAASKAGVVLFTRSLA---YYRRQGIRINV 194

  Fly   180 ICPGF--------TDTGLLEDIG 194
            :||.|        .|..:||.||
plant   195 LCPEFIKTDLAEAIDASILESIG 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 59/217 (27%)
NQRNP_001185182.1 ADH_SDR_c_like 9..254 CDD:187584 59/215 (27%)
Mgc45594_like 286..640 CDD:176212
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.