DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4842 and AT5G06060

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_196225.1 Gene:AT5G06060 / 830493 AraportID:AT5G06060 Length:264 Species:Arabidopsis thaliana


Alignment Length:218 Identity:56/218 - (25%)
Similarity:90/218 - (41%) Gaps:39/218 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LAGKNVVYLGGFGGIGQKCVQELLQRPIKALAIF----DLNANEQLLAKWKSQHPDTDVFYHKLD 63
            ||||..:..||..|||:..|:||.:...|.....    :|||   .|..||:...          
plant     9 LAGKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNA---CLNDWKANGL---------- 60

  Fly    64 ITQKSDIDAAYKATAERF---------GHFDVVVNGSGL-MNDRLVELTIQINLLGVINSTLTAL 118
            :...|..||:.:...|:.         |..::::|..|. :....||.:.: ....::::.|.:.
plant    61 VVSGSVCDASVRDQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEYSSE-EYAKIMSTNLESA 124

  Fly   119 EYMD-------KAKGGKGGLIVNISSVAGLQPTAIMAIYSAAKTGVTTFTRAMANPYFYAHSGVG 176
            .::.       ||.|  .|.||.|||||||...:..:||.|.|..:...||.:|..  :|...:.
plant   125 FHLSQIAHPLLKASG--VGSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLACE--WASDNIR 185

  Fly   177 FLTICPGFTDTGLLEDIGNKTTF 199
            ...:.|.:..|.|:|.:..|..|
plant   186 TNCVAPWYIKTSLVETLLEKKEF 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 53/215 (25%)
AT5G06060NP_196225.1 TR_SDR_c 6..256 CDD:187590 56/218 (26%)

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