DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4842 and NYC1

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_567400.1 Gene:NYC1 / 826942 AraportID:AT4G13250 Length:496 Species:Arabidopsis thaliana


Alignment Length:260 Identity:63/260 - (24%)
Similarity:98/260 - (37%) Gaps:52/260 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KNVVYLGGFGGIGQKCVQELL---QRPIKA--------LAIFDL---------NANEQLLAKWKS 50
            :|||..|...|:|:...:|.|   .|.|..        :.:.:|         ||:|....|.. 
plant   162 RNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKEIMSNASESARKKLS- 225

  Fly    51 QHPDTDVFYHKLDITQKSDIDAAYKATAERFGHFDVVVNGSGLMND--RLVELT-------IQIN 106
               |..|.....|:.:..|::.......:..|..::.:|.:|....  .|:|.|       :..|
plant   226 ---DAKVVGIACDVCKPEDVEKLSNFAVKELGSINIWINNAGTNKGFRPLLEFTEEDITQIVSTN 287

  Fly   107 LLGVINSTLTALEYMDKAKGGKGGLIVNISSV-AGLQPTAIMAIYSAAKTGVTTFTRAMANPYFY 170
            |:|.|..|..|::.|.:..  .||.|.|:... :|...|.:.|:|.:.|.|:..|..::...  .
plant   288 LIGSILCTRGAMDVMSRQH--SGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFHGSIVKE--S 348

  Fly   171 AHSGVGFLTICPGFTDTGLL---EDIGNKTTFTYDTPMLAMFNRVKRQKAEDCARNLVSAIETSK 232
            ..:.||..|..||...|.||   ..|.||          .||| :..:..|..||.||..:...|
plant   349 QKTNVGLHTASPGMVLTELLLSGSSIKNK----------QMFN-IICELPETVARTLVPRMRVVK 402

  Fly   233  232
            plant   403  402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 63/260 (24%)
NYC1NP_567400.1 SDR_c 164..395 CDD:212491 59/249 (24%)

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