DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4842 and SDR2

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_190736.1 Gene:SDR2 / 824331 AraportID:AT3G51680 Length:303 Species:Arabidopsis thaliana


Alignment Length:275 Identity:71/275 - (25%)
Similarity:116/275 - (42%) Gaps:42/275 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LAGKNVVYLGGFGGIGQKCVQELLQRPIKALAIFDL-NANEQLLAKWKSQHPDTD-VFYHKLDIT 65
            |.||..:..||..|||:..|. |..|....:.|.|: |.....|||..|.|..:. |.:...|::
plant    32 LEGKVAIITGGAHGIGKATVM-LFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFISCDVS 95

  Fly    66 QKSDIDAAYKATAERFGHFDVVVNGSGLMNDRLVELTI------------QINLLGVINSTLTAL 118
            .::|::.....|..|:|..|::.|.:|::.|:....:|            ::|:.||    ...:
plant    96 VEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVRGV----GLGM 156

  Fly   119 EYMDKA--KGGKGGLIVNISSVAGLQPTAIMAIYSAAKTGVTTFTRAMA---NPYFYAHSGVGFL 178
            ::..:|  |.|..|.|::.:||||:........|:|:|..:...|:..|   ..|     |:...
plant   157 KHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELGKY-----GIRVN 216

  Fly   179 TICPGFTDTGLLEDIGNKTT----FTYDTPMLAMFNR-VKRQKAEDCARN------LVSAIETSK 232
            .|.|....|.:|.:...||:    ...|...:..|.| :...|.|....|      |..|.:.||
plant   217 CISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIAEAALYLASDESK 281

  Fly   233 --NGTVLMLEMGETT 245
              ||..|:::.|.||
plant   282 YVNGHNLVVDGGVTT 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 69/272 (25%)
SDR2NP_190736.1 Rossmann-fold NAD(P)(+)-binding proteins 31..295 CDD:473865 69/272 (25%)

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