DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4842 and AT3G29260

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_189571.1 Gene:AT3G29260 / 822582 AraportID:AT3G29260 Length:259 Species:Arabidopsis thaliana


Alignment Length:220 Identity:52/220 - (23%)
Similarity:93/220 - (42%) Gaps:38/220 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LAGKNVVYLGGFGGIGQKCVQELLQRPIKALAIFDLNANEQLLAKWKSQHPDTDV-----FYHKL 62
            |.||.|:..||..|||.:..:.......| :.|.||  .|:|     .|:....:     .:::.
plant     6 LDGKIVIITGGASGIGAEAARLFTDHGAK-VVIVDL--QEEL-----GQNVAVSIGLDKASFYRC 62

  Fly    63 DITQKSDIDAAYKATAERFGHFDVVVNGSGLM--NDRLVEL-------TIQINLLGVINSTLTAL 118
            |||.:::::.|.|.|.|:.|..||:.:.:|:|  :..:::|       |:.:|:.|.......|.
plant    63 DITDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHGSILDLDLEAFDRTMAVNVRGAAAFIKHAA 127

  Fly   119 EYMDKAKGGKGGLIVNIS---SVAGLQPTAIMAIYSAAKTGVTTFTRAMA---NPYFYAHSGVGF 177
            ..| .|.|.:|.::...|   .:.|..|.:    |:|:|..:....|:..   ..|....:||..
plant   128 RSM-VASGTRGSIVCTTSVTAEIGGPGPHS----YTASKHALLGLVRSACGGLGKYGIRVNGVAP 187

  Fly   178 LTICPGFTD-----TGLLEDIGNKT 197
            ..:..|.|.     ..::||..:.|
plant   188 YGVATGLTSYNEETVKMVEDYCSAT 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 50/217 (23%)
AT3G29260NP_189571.1 Rossmann-fold NAD(P)(+)-binding proteins 5..252 CDD:473865 52/220 (24%)

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