DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4842 and SDR4

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_189570.3 Gene:SDR4 / 822580 AraportID:AT3G29250 Length:298 Species:Arabidopsis thaliana


Alignment Length:220 Identity:54/220 - (24%)
Similarity:89/220 - (40%) Gaps:43/220 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LAGKNVVYLGGFGGIGQKCVQELLQRPIKALAIFDLNANEQL---LAKWKSQHPDTDVFYHKLDI 64
            |.||..:..||..|||.:.|:.......|.:.:   :..|:|   ||  .|...|...|| :.::
plant    44 LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIV---DIQEELGQNLA--VSIGLDKASFY-RCNV 102

  Fly    65 TQKSDIDAAYKATAERFGHFDVVVNGSGLMN-------------DRLVELTIQINLLGVINSTLT 116
            |.::|::.|.|.|.|:.|..||:.:.:|::.             ||    |:.:|:.|.......
plant   103 TDETDVENAVKFTVEKHGKLDVLFSNAGVLEAFGSVLDLDLEAFDR----TMAVNVRGAAAFIKH 163

  Fly   117 ALEYMDKAKGGKGGLIVNIS---SVAGLQPTAIMAIYSAAKTGVTTFTR---AMANPYFYAHSGV 175
            |...| .|.|.:|.::...|   .:.|..|.:    |:|:|..:....|   |....|....:||
plant   164 AARSM-VASGTRGSIVCTTSIAAEIGGPGPHS----YTASKHALLGLIRSACAGLGQYGIRVNGV 223

  Fly   176 GFLTICPGFTD------TGLLEDIG 194
            ....:..|.|.      ..:||:.|
plant   224 APYGVATGMTSAYNEEAVKMLEEYG 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 52/217 (24%)
SDR4NP_189570.3 Rossmann-fold NAD(P)(+)-binding proteins 44..291 CDD:473865 54/220 (25%)

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